| Id Trinity | TRINITY_DN49662_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_414456 |
| Sequence | GGGAAAGACACGTAGACGAAGTGGGAGTTAGTCCAATGGTATAGAAGCATGTGTAGCACGTGGTGTTACTGTAGCTGTTTTGTTTTTGTTGTCACGTGAA CCACACCCATAGCCATTGCGACAGCGTTACTCATTACCCGTACCCTCTTCTTTCCTTATATTCCAATCCACGCTTCCTTCCATTATCGTCTTCACTCTCC TTCCATCTGCAAATGCTTCAACCTATTCACGATAGTTAGGGATCTCTAAGTTGATAAGGGGAAACAATTTTGCTGCTCGATACAAGGATGCGGGTTGTGT TGCTTTATTTGGTTCTTGCTTCCTTTGTCCTTTTGAGCTCTATCAAAGATGGGAGTGCAGGGATCACTAGCAGTTTCATTCGGTCCGAGTTCCCGTCTAC AGACATCCCTCTTGATCATGAAGTATTTGCAGTTCCAAAGGGCTATAATGCACCTCAACAAGTAAATCTTCCGCCCCGTTGCTTTTATTGTTTACTCCCT TGTATCATCTGATGAAACTGTGATGATGGTATTAGGCCTCAGCACTATGGAGTCTGGAATTGGACATGTGAAGCAGTTTTAAGTTATTTCATTTATTTGT TAATGTACATATTGGTTGTCCGACCCATCTTTAATCCTTGCGTATAACGGGAACTTTAAACCATCAGGTTTTCTATTGGTTATTTTTACTCTAGAAACCA CATACTATAGAATGTTCACCATATCGTATTAGAACTTTTGTCTTTTTCAATAAGCAAGTCACCTAACACTATAAGATTAAAGATTCATGTTCAGAAATAT GTATCTGCCACTGGAAGTATTGATGCCATGGTTACATGAAAACATTCCACTGGTAGATACTAGATGATAGATATTTTATACTTGAACTGAAATGATGATT CCACTTGACCATGACTTTTTGTTGTATCATTTTGTTCAAACAAAGACATAATATCAATGATAAACTTATGATTTGCTGCATTGATTGTTTCGAATTAGGT GCATATCACCCAAGGTGACTATGATGGAAAAGCAGTAATCGTCTCATGGGTGACTACAGATGAACCAGGCCCTAGCAAAGTACAATTTGGCACATCAGAG AATAAATTTCAAACTAGCGCAGAAGGCACAGTTTCAAACTACACTTTCTACAAATACAAGTCTGGTTACGTTCATCATTGTCTTATTGAAGGCCTTGAGT ACAAGACTAAATACTACTACAGAATAGGAAGTGGTGATGCTTCTCGAGAATTTTGGTTTGAAACACCTCCCAAAGTTGAGCCAGATGTACCTTACAAATT TGGGATCATTGGTGATTTGGGCCAAACATTTAATTCTCTATCAACTCTTGAGCATTACCTGCAGAGTGGAGCACAGACTGTGTTATTTGTTGGAGATCTT TCTTATGCTGATAGGTACAAGTACAATGATGTTGGTTTGCGATGGGACACATGGGGCCGGTTTGCCGAAAGGAGTACAGCATATCAACCATGGATTTGGT CTGTTGGAAATCACGAAGTAGATTACATGCCTTACATGGTAGGGTTCTAACCCGAATCTGCATATGTCTTGGCTATTCATTTTCACTAACTCACTTATAG ATTGAAATTAAGCCATTATTTTATGTGGCAATAAAATAATAAACCATAACTACGATTTTCATCTCCCTTTTTCTTCGCCTTTTGGAATTAGAGGGTACAA GAGAAATGTGCAATTTTCTACTTATAGCTAGTTTATCCCTTGTCTTGAATTATACATGATTATTGCCCTGGAAAGATATTTTAAGTCTCCCAGCAATGTA TTCTTGTTGGCTGTTTCATAGCAAAGCTTAATTGATGCATGCTCATTTACTTGATACAACATAGCTGACTATCGGCTCAATCAAAGTAGCAAACTATGAT TTGGACTAGTAGTGTTCTGTGTTATATGCTGTCCTTTATATTTATACAGTCCTAGAGCAAATCCCGTATGATTTCTTTAGAACATTGTGAATAAGCAGGC AGCTTAAGATATTCCAAATTTCAAGGGACAAATAAACTTTTATTTTGTACAGAAAATAGTCATTTACTACTAGGTTACTGAGTCCCAATTGATACCAAAC GCAAGTGAAGTGAATATTCTTGAAATTGTTGTAAAACTAGGTTGACCTTTTTGAAGTTTCTTTCAGTTTAAGACTTCAATTTTCTCCTGTGTCCATGTCG ACTCTTTGCATTGAAGACTATAAACTTGCCTCTGATGTTGTTAAATAAATCTGCATGGTCAGGGAGAAGTTACTCCTTTCAAGAACTTCCTTAACCGATA CACTACTCCTTATTTGGCCTCCCAAAGCAGCAGTCCACTCTGGTATGCCATCAGACGTGCATCAGCTCATATAATTGTGCTATCCAGCTATTCACCATTT GGTAACAAATCTCCCCATTATTACTTAATAATTTTCTGTAAATGTTGATGGACAGTTATACATTTAAATAGGTGCCATAATATTAGTATCCTTGTTTCTC TTACACAAAACTATGCAAGCTTTACATCAGTAAGTAGAAAGTGCTATTTCTCCTTCATGACAGAGATGTCCTATTGATCACTACAACAACAACAACCAAC CCTTTATCTCATTAGGTGGGGTCGGCTACACGGATCTAACGATGCCATAATGCTTTATCGTAAATCATGGCGTATTGACCCCTAATAAAGAAATAGAAAT GAAGAATAAATAAGTGTTCTAAATTCAAGCAGAAGGGTCGTATTGTACCAGGATACCAATATAAGCAGCAAGCAATAAATTTTCTAATAAGGAAACAGAG AAAATTGATGAAGAAAATATATTTACTTTCACACCAGGTCTCAAATGCTAGTCCCAGTTGTTAGTTTGTCTTTAGGAATGGTGAGACCACATTTTGTTGT TTCTAGGTCTTAAGAACATACACATTGTTATTGAGAGAAGTTTCTGTGCCAGTTGAAACAGTCACTGTCTGTGGCGTATGCTTCTCAACTGCCATGATTT GTTGTAGCATAATCTTTTTTATTTAAGATATGCTTCCTTTTATGATATTTTTCCACAACACTGATATTTTTTCACAACACTGATGTTTTTCATAACAGTA AAGTACACACCTCAATATACGTGGCTCAAAGAAGAGCTCACGAGGGTTGATAGGGAGAAGACACCTTGGCTCATTGTTCTCATGCATGTGCCGCTCTACA ACAGTAATGAGGCTCACTATATGGAGGGTGAAAGCATGCGATCAGTTTTTGAGAGCTGGTTCATCCATTACAAAGTTGACGTCATCTTTGCTGGTCATGT CCATGCTTATGAAAGATCATATCGGTTCTCCAATACAGACTACAACATAACAAGCGGTCACCGGTTTCCCATAGCAGACAAATCAGCACCTGTTTACATA ACAGTTGGAGATGGAGGAAATCAAGAAGGCCTTGCTTCAAGGTAAAATAAACTAATCAATTTGTCATGTATAGTCAGTTATGTTATTTAAAAAAGGTTAT CTTACAACATCCTCTCTCTTTTCAGTTTCTAGTTAACCCTTTATGATTGAATCCTGGTAGGATGTTGGTATTCTTAGTTATCATTTATCAAATATGTCAT ATGATAACCCCTGGTTATGAGATATATCTGAGAAGGGACAGAATGAGAGTCAGTGGATACTTAAGAGCAAGTCGATGACCTGCATTATAACAGTATGCTT ACATGGCAGTGAAAAAGGGGCGAGAATGGAAATTCAGTTAGGAGTGAGTAGGGATAAATGTGAGGTGAGCTGAGAGTAGAAGTAGGCAATTATTCAGAAA GGTTTGGAGCCAATTGGCTAGCGAGGAAGCAAACCCTCTAAGTTTTCAGATCTTTTTTACCTTTTTCCATTCTTGTTCTTTTTAGCGTAAACCACATTGT AACAAGCTAGGGCGCCATTATTGTTATAGTAAGTTTATGATAATATCATCCTATAATTCAAGTGTTTCTTCCTTGGTTGTGTAGGTTTACTGATCCACAG CCAGAATATTCTGCCTTTCGAGAAGCCAGCTATGGACACCCAACACTGGAGATAAAAAATAGGACCCATGCTATCTACCACTGGAACCGCAATGATGACG GCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_171185; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_414456
| Blastp | Phosphoenolpyruvate phosphatase from Allium with 85.22% of identity |
|---|---|
| Blastx | Bifunctional purple acid phosphatase 26 from Arabidopsis with 75.56% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440753.1) |
| Pfam | Calcineurin-like phosphoesterase (PF00149.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |