Id Trinity | TRINITY_DN49663_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_415470 |
Sequence | AAGCTAACTACTAAGCAATTCTCAAAGACCAATAGAAAAGAATGGGTTGGTCCATTTTATGCTTTCAGCTTCTTGTTTCATCCTTTATTCTTTCAACTTT GTTTTGGAATGTTGTCCATGCCAACAAAAAGTGCTACATTGCATACTTAGGAGCACATTCTCATGGTCCAACTCCTTCTTTGCTTGATCTTGAAACTGCC ACATATTCTCATTATGATTTACTAGCTTCAGTCATTGGAAGCCATGAGAAGGCCAAAGAAGCTATTATTTACTCATATAATAGACACATCAATGGCTTTG CTGCACTACTTGAAGAGGAAGAAGCAGATAATCTTGCAAAAAAGCCAAATATAGTATCAGTGTTCTTGAGCAAAGAGCATAAGCTGCACACAACTCGTTC ATGGGAGTTTCTTGGATTACAAAGAAATGCTATGAACACAGCATGGCAAAAAGGAAGATATGGGGTCAATACAATCATAGCTAACATTGATACAGATGGA AAAAATATTCGCTGGGAGAGTTAGCTCCACATACTCGTTGATGTTCCCGGCTCAAACAGAATTGTCTCTAGTGCGATGATACCTATGGGAAACAAAAAAA ATTCTTCCACACGGTCTAGTGTTTGGCCTGAATCCAAGAGTTTCAATGATAAAGGAATAGGTCCTGTCCCTGCAAAATGGCGTGGGGGAAAGATTTGTCA AATTAACAAACTACATGGTTCAAACAAAGTCCCATGCAACAGATGTGTTAATCACAGGGGGTTGATGACTCTGAAATTTGCTTTGTTAAAAGCTATCTTC ATTTGAAAATACTTCCTTGGACTTGAAATATCTTCTCACAAAGGAAATTAATTGGAGCAAGATTCTTCAACAAAGCTTTTGAAGCAGCTAATGGCAAACT CCACCCATCACAGCTTACAGCAAGAGACTTTGTAGGGCATGGTACCCACACTCTATCAATTTCTGGTGGAAATTTTGTTGGTGGTGCAAATGTCTTTGGT AATGGAAATGGCACTGCTAAGGGTGGTTCACCAGGTGCTAGGGTTGCAGCCTATAAAGTATGTTGGTCTCTAACAGATGCTAGTAGTTGCTATGGTGCAG ATGTGTTATCTGCTATTGATCAAGCCATAAGTGATGGTGTTGATATCATTAGTGTTTCTGCTGGAGGAAGAGATAGTATAAGTCCTCAAGAAATTTTTAC TGATGAGGTTTCTATAGGGTCATTTCATGCACTTTCTAATAATATTGTTGTAGTTGCTTCTGCTGGAAATGATGGACCACAACCTGGAACAGTTCTAAAT GTGGCTCCTTGGGTATTCACAGTTGCTGCAAGCACAATAGATAGGGAATTCTCAAGTACTTTATCTCTTGATAACAATAACCAAATCACGGTATAATCTT TCTTCTTTTTCCTCCATTAGTTAAGTCTTCTATGAAACATGGAATCTATTTTTTTCCTAAAAGACAATTTCCATCATATATAAGATATATTTTGATATTT TGCTAGAAGTAGAAAAAGTTCTTGGGTCTAACATAAAATTACAAGTTTGTATAATACCATAAGTTATGATCGGAAGTGGCGTTTCCGTGGCGGATGGGTG AGTAACGCGTAAGAACCTGCCTTGGGAGGGGAACAAACAGCGGGAAACAGCTGCTGATACCCTATAATTATGGAAAAATTTGGTTATTATGGTTATGATG TTGTGAAGACTTCGAAATCATAAAGTTATTTTTGCGGAATATAATTGATAACATTGGTGTAGTGTAAGAAATACTTCTTGCCCCATAGAATTTGTATCTT ATAAGTTGTGTTGAATTAATGTTTATTATGTGAATATGGATGGACAGGGAGCTAGTCTTTTTGTGAACTTGCCACCTAAGAAGTCTTTTACTTTGATCCA AGCTACTGATGCTAAACTTGCAAATGCCACATTAAGAGACGCTCAACTTTGTAAGCCTAGAACACTTGATCCCTCAAAAGTAAATGGTAAAGTAGTAATT TGTGTTAGAGGTGGGAAAATAAAATCTGTTGCAGAAGGCCAAGAAGCATTATCTGCAGGTGCATCAGGAGTTGTTATGGGCAATGATGATCAAAGTGGAA ATACAATTCTAGCTGAGCCTCATGTTTTGTCTACAATAAATTTCAATGAGCAGACATTTAAGAGTAATATTCACAACATTAAACCCACTTCCAATCACTC TACTATAAAGATGTCTATAGCAAGAACACTACTTGGAACAAAGCCAGCTCCGGTTATGGCTTCTTTTTCTGCAAGAGGACCTAATCCGATTCAACCATCA ATACTCAAGCCAGATATTACTGCACCAGGAGTGAACATACTTGCAGCTTATTCAGAAGCAGCAAGTGCATCAAACTTACCATCAGACACACGTCGTGGAT TTCCATTCAATGTACTACAAGGGACTTCTATGTCTTGTCCTCATATTGCTGGTGTTGCTGGACTTCTTAAAACACTTCATACTAATTGGAGTCCAGCTGC TATTAAATCAGCTATCATGACCACAGCAACTACAAGAGATAACACAAAGAGACCAATTCGTGATGCATTTGATAAAACATTAGCTACACCCTTTGCATAT GGTTCAGGACATGTTCAACCAGACTTTGCTATGGACCCTGGACTTGTTTATGATATAACCATTGTTGATTACTTGAATTTCTTATGTGCCTCTGGGTATA ATCAAAAACTCATTGCAGCACTTAGAAATTCCAAAAAACCCTTCATTTGTTCAAAATCTCACAGCACAGTAACAGACTTGAACTACCCTTCAATCACATT ACCAAATCTTGGGTTAAGTGCAGTAAATGTTACTCGTGTAGTCACTAATGTTGGAACTCCAAGCACATATGTTGCTAGTGTTTATTTACCTGGGTTTAAG GTTGTTGTTGTTCCAAATTCATTGAGTTTTAAGAAGGTTGGTGAGAAGAAAATATTCCAAGTTGTTGTGCAAGCAACAAGGGTGATTCCACGTGGGAATT ATCAATTTGGGGAGCTACAATGGACAAATAATGTAAATCATGTTGTTAAGAGTCCTATTGTTGCTAGACGCAAATGAGAAATATAATAATGACTAGAGAG TTATTGTGTCATGTGTGTATACTTTTGAGGTACAAATATATGGCTATAATATATAAACATTTCACTATTATATGTTTAATGTATTTTTTTAAGGAGAATA ACATGAATACAGACACATGTTAAAATAAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_171190; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415470
Blastp | Subtilisin-like protease Glyma18g48580 from Soja with 65.71% of identity |
---|---|
Blastx | Subtilisin-like protease Glyma18g48580 from Soja with 65.71% of identity |
Eggnog | peptidase (S8 and S53, subtilisin, kexin, sedolisin(COG1404) |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002900) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451659.1) |
Pfam | Subtilase family (PF00082.21) |
Rfam | SSU_rRNA_bacteria (RF00177) |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |