Id Trinity | TRINITY_DN49663_c1_g1_i6 |
---|---|
Name Transcript | Ll_transcript_415476 |
Sequence | AAGCTAACTACTAAGCAATTCTCAAAGACCAATAGAAAAGAATGGGTTGGTCCATTTTATGCTTTCAGCTTCTTGTTTCATCCTTTATTCTTTCAACTTT GTTTTGGAATGTTGTCCATGCCAACAAAAAGTGCTACATTGCATACTTAGGAGCACATTCTCATGGTCCAACTCCTTCTTTGCTTGATCTTGAAACTGCC ACATATTCTCATTATGATTTACTAGCTTCAGTCATTGGAAGCCATGAGAAGGCCAAAGAAGCTATTATTTACTCATATAATAGACACATCAATGGCTTTG CTGCACTACTTGAAGAGGAAGAAGCAGATAATCTTGCAAAAAAGCCAAATATAGTATCAGTGTTCTTGAGCAAAGAGCATAAGCTGCACACAACTCGTTC ATGGGAGTTTCTTGGATTACAAAGAAATGCTATGAACACAGCATGGCAAAAAGGAAGATATGGGGTCAATACAATCATAGCTAACATTGATACAGATGGA AAAAATATTCGCTGGGAGAGTTAGCTCCACATACTCGTTGATGTTCCCGGCTCAAACAGAATTGTCTCTAGTGCGATGATACCTATGGGAAACAAAAAAA ATTCTTCCACACGGTCTAGTGTTTGGCCTGAATCCAAGAGTTTCAATGATAAAGGAATAGGTCCTGTCCCTGCAAAATGGCGTGGGGGAAAGATTTGTCA AATTAACAAACTACATGGTTCAAACAAAGTCCCATGCAACAGATGTGTTAATCACAGGGGGTTGATGACTCTGAAATTTGCTTTGTTAAAAGCTATCTTC ATTTGAAAATACTTCCTTGGACTTGAAATATCTTCTCACAAAGGAAATTAATTGGAGCAAGATTCTTCAACAAAGCTTTTGAAGCAGCTAATGGCAAACT CCACCCATCACAGCTTACAGCAAGAGACTTTGTAGGGCATGGTACCCACACTCTATCAATTTCTGGTGGAAATTTTGTTGGTGGTGCAAATGTCTTTGGT AATGGAAATGGCACTGCTAAGGGTGGTTCACCAGGTGCTAGGGTTGCAGCCTATAAAGTATGTTGGTCTCTAACAGATGCTAGTAGTTGCTATGGTGCAG ATGTGTTATCTGCTATTGATCAAGCCATAAGTGATGGTGTTGATATCATTAGTGTTTCTGCTGGAGGAAGAGATAGTATAAGTCCTCAAGAAATTTTTAC TGATGAGGTTTCTATAGGGTCATTTCATGCACTTTCTAATAATATTGTTGTAGTTGCTTCTGCTGGAAATGATGGACCACAACCTGGAACAGTTCTAAAT GTGGCTCCTTGGGTATTCACAGTTGCTGCAAGCACAATAGATAGGGAATTCTCAAGTACTTTATCTCTTGATAACAATAACCAAATCACGGGAGCTAGTC TTTTTGTGAACTTGCCACCTAAGAAGTCTTTTACTTTGATCCAAGCTACTGATGCTAAACTTGCAAATGCCACATTAAGAGACGCTCAACTTTGTAAGCC TAGAACACTTGATCCCTCAAAAGTAAATGGTAAAGTAGTAATTTGTGTTAGAGGTGGGAAAATAAAATCTGTTGCAGAAGGCCAAGAAGCATTATCTGCA GGTGCATCAGGAGTTGTTATGGGCAATGATGATCAAAGTGGAAATACAATTCTAGCTGAGCCTCATGTTTTGTCTACAATAAATTTCAATGAGCAGACAT TTAAGAGTAATATTCACAACATTAAACCCACTTCCAATCACTCTACTATAAAGATGTCTATAGCAAGAACACTACTTGGAACAAAGCCAGCTCCGGTTAT GGCTTCTTTTTCTGCAAGAGGACCTAATCCGATTCAACCATCAATACTCAAGCCAGATATTACTGCACCAGGAGTGAACATACTTGCAGCTTATTCAGAA GCAGCAAGTGCATCAAACTTACCATCAGACACACGTCGTGGATTTCCATTCAATGTACTACAAGGGACTTCTATGTCTTGTCCTCATATTGCTGGTGTTG CTGGACTTCTTAAAACACTTCATACTAATTGGAGTCCAGCTGCTATTAAATCAGCTATCATGACCACAGGTATATTAGTCCATTACATTCTACTGTTTCA TTAACTAAAAACTGATTCTATTTGATGGGCTGAAATCTTAATGCCCATATAAGGGAATAGAGGTTAGGATTACTCTATCTATAATACTTATCTTTTACCT GATCCTAAATATTGACCGAATTATTTTTTTGAACTTGAACTCGGCTCTAGACGCGAAAGCTAATCCTACATCAAATGTCGATTGGGTTAGCTTTTGAACT CGAACCTGCCCTTAGAAACAATTGAGTAGACACATAGAAACAAGACGAATGGATACCATGGGACAAGTCGGATTAGATGATGTTTGTCTTTTACTTGACC ATAAATATTGGTCGAGTCAAATTTTTCAATTGAAACTCGACCCTAGACCTGATGAAATCCAACCATAATCAGGTCGAATCATGACCGGATCAAACAGGTA AGCGGGTAGGATCAGGTCCTACTCATCCCTATAAGAGATATAGAGTGAGCCTTGGTGTAACAGTGAGATAGCTTCCTAGTAATCAAGAGGTGACGAGTTC AAATCCTGGAATCATGCCCTTTTAATACATCCTAAAGCGATGGTAAATATTAGAAGAGGAATGATCATTGTTTTAAATTGCACTTTACAACCATAATTAT GCCACATTTTCCAGCAATTTTTCGTAATTGCCATAGAAGGAACCGCAATTAGAACAATGAAATTGATATCACTTGTTTAACTTGTGAGTTTATATAACAT TTAACTTTGAATATCTATACAATGATTTAATGATAGAAAAATGCACATATTACTATATCATATGCATGTCTCAGTTTTACACTATATCTAAATTATTTAA ATGCACTTTTTTCCAGCAACTACAAGAGATAACACAAAGAGACCAATTCGTGATGCATTTGATAAAACATTAGCTACACCCTTTGCATATGGTTCAGGAC ATGTTCAACCAGACTTTGCTATGGACCCTGGACTTGTTTATGATATAACCATTGTTGATTACTTGAATTTCTTATGTGCCTCTGGGTATAATCAAAAACT CATTGCAGCACTTAGAAATTCCAAAAAACCCTTCATTTGTTCAAAATCTCACAGCACAGTAACAGACTTGAACTACCCTTCAATCACATTACCAAATCTT GGGTTAAGTGCAGTAAATGTTACTCGTGTAGTCACTAATGTTGGAACTCCAAGCACATATGTTGCTAGTGTTTATTTACCTGGGTTTAAGGTTGTTGTTG TTCCAAATTCATTGAGTTTTAAGAAGGTTGGTGAGAAGAAAATATTCCAAGTTGTTGTGCAAGCAACAAGGGTGATTCCACGTGGGAATTATCAATTTGG GGAGCTACAATGGACAAATAATGTAAATCATGTTGTTAAGAGTCCTATTGTTGCTAGACGCAAATGAGAAATATAATAATGACTAGAGAGTTATTGTGTC ATGTGTGTATACTTTTGAGGTACAAATATATGGCTATAATATATAAACATTTCACTATTATATGTTTAATGTATTTTTTTAAGGAGAATAACATGAATAC AGACACATGTTAAAATAAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_171190; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415476
Blastp | Subtilisin-like protease Glyma18g48580 from Soja with 61.96% of identity |
---|---|
Blastx | Subtilisin-like protease Glyma18g48580 from Soja with 70.81% of identity |
Eggnog | peptidase (S8 and S53, subtilisin, kexin, sedolisin(COG1404) |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002900) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451659.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |