| Id Trinity | TRINITY_DN49685_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_415943 |
| Sequence | TGCTCTTATTTTTGTTCTGATTATAATAAGCAGAAGAGAAAAATAATAAAAAATTAAAATGCATAGTTGCTTGTAGTAGATGATCACTCCAACTCAAAAG CTTGTGGTGAATGTGTGTCTTGCAAGTCACCATTCTTATTTTTTCTTTATGTTGATGGTTTAATAAGAAACCTTTTTGAGATTGGATTTGGTTATTCTTG CTTTACCATGAATGAATGCTTTGTTGTGGTTTCTTCAACTTTGTTTTCTCTGATATATTTGCTTGCTACTTTACTGATCAGTCACTAAGATTTTAATTTG CGGTTCGCACCACAATTTTTTGGTTTCGGTAGTCTCTGAAACTGCATCATAGTGACAATTGTGGTCACATCAACTGTATTTCGTGCAATTATCCGTCACT GCCATAATTGCGATTGCAACCGCAGTTTAAAATTACACCCTCACTTCTGTCCTGTATTTTGATGATAGATCAGGGTTGGGTTCCCTCCTTCCCGTGTTCT ATGTACACAAATTTAGCTGATACTTTATTCCGGTCTATTCTTCCGGCCTCTCATAGCCTCATTGTTGTTGGGACCTTGTTATATGATTCTTTGTTAAAAG TGCATTCCATTTTGGTCAGTTTAAGGGTCTGATAATGTGATTTATTATCAAGGGACAATTATTGTTAGAATTACTGTAATGCATAAATTGACAAATATGT GAGATATATATGATTATGTGTTTTGTTATCTTGTTGTTTTTAACGTGCTTCTGTTACGGCAATGTGAACTCCGGGATTGATGCATTCATTGAATTTTTTT CCAGGCATATTCCCGTATGGTGGTCTTGAGATCTGTTCCGATCACAGTTCTTGTTATATATGATGCCCTTGAGTTTCTGCATATGCACTGTAAACAAGGT GGTTGTAATGTCTCCAATGTGGATGCCTCCAGGAGATATGTAGTAGAGAAATCTTCTCGGTTTCGAATTACTTGTGTCAGATTTCTTTTATAATAAAAGT TTTATTCCAATTTTAGTTGCAAATAGGTAGTATAAAAAAGTTGAATAGTGAAACTGGTAAGGTTGGGAGTGGGTATTGCCCTTAGATGATTGGTACGTTT ACCGTGATCATGTGGTAAAACGGCAATGGTGAAGTGAACAATATAAATCACAGAGGAATCACATTGACAATATAAACTATAAGGCAAGCCGTTCACCTCT TCCCGAAGATCACTATTTGATTCAAATACTAGTGATGGGCTTGCCACAATCACCCCAAAGTGAAACCGATGAAAAGGTTGAACCGTTGTCTGCATTTCTG CATTGCTCACCGCAGTTTTCTGATGCAAGTCCGTCTAATATAAACAGCATGAAAAATGTAAGCACATGTGGACCGGATGCATGTTCCTCGGGATCCTCAT TTGATGATTTCCCGAATTATAGAGGAGCCGCGGAAGTCACTTCCAATGTGCACAGTTTGAAGATTGGTTCAACAAATAGAAATGTTTGTTCTTCAATAAA TGGACAAGGTGTTCATGTCCCTGTTTCTAGGGTTGTGGGTTTCGAATCAGGGCGAACAAGTTCTCTGACTAATGAGACAACTGGAGTTTTGGCTTCAAAC TTTGATTCTTCCGTTTTTACTAATGTTGCCGCCAAAAATACTGGACCAGTCAGTTCACTGGCCAGGAAGCGATTGTTATCCCCGCTGAGCAGCATGCTCT CCCCAAGTCATTTCAACGGTGACCCTCTTGATATTAGCTGGAAAAATAACAAGACTACCTTCCTTGTTAAGAATGATAATTCCCGAAACTCCGTTGCACA AGATAATAAGAAGGCGAATATTGGATGTAAAGATAGTTGTACAATGCCTTCTTGTTCCTGGTCAAATATTTGCTTGGAGCGAGAAAATGAGTCGTGCAGT AATGAGTCCTTTTTACTAACAGATGGTCCTTTGCTGGAAAATGGAGGACTATTGTCACATAGTATGCAGAGTAGTTGTCTCCCCACAGCCGGAATTCATC ACTTTAGCGGATCAAGTGTGTTAAGATTCCAAAGTGACACACTATCTACTTCTCCTAAAAAAGCTAGCTCTCCTCTTTCGTTGTCACTACTTGGTCCTAA ATTTTCTGAAAGGATAAAAACTGCTAGAAGATGTAGGAATGCTGTTACAGAGATAGACAGTTACAATAGAGCTTTAAGGAGTATAGAAAACTCAGTTAGC AGATCTAACTCCTGTTTTGTGAATCAGAAGGAAGATAATTTCGGAATTTCGAGCAAATCTTTTGAAGATGTTGAATTGTTTTCCAAAGACTTCTGTCCAT CTTTGCTTGAAGATACTGCTGACATAAGCTGGCCACTATCTCAAGAATCACCACCGACCTCTCACTCGATGCGATTCATTAGAAGTTTGAGTGGGCTTCC AGTCCGGAGGTCGTTGGTTGGTTCATTTGAGGAGTCTCTTTTATCTGGCCGGTTCTTATGTGGAAACCTTAGTAAGAAAATCGACGGTTTTCTGGCTGTG CTAAGTATTACTGGGGGCAACTTCTCTCCAAAATCACAAAAACTCCCATTTTCTGTAACAAGTTTGGATGGAGATCGCTACCTATTGTACTTTGCGTCAA TAGACCTTGCGGGGAATTCGTCATCAGACAAATCTAGAGGCCATAAACTGAAGCGATCATTTAGCAATGAGGATCCACAAATTGTCAAAAGCCGCATGCG GGTACCAATGAAAGGACGGGTACAACTGGTGCTAAGCAATCCGGAAAAGACGCCTATTCACACTTTGTTTTGCAACTATGATTTGAGCAACATGCCAGCC GGTACCAAAGTACGATTTACTGCAATATGAATGAATATCGGCCTCGACTACTCTGGACTTTTTAGTTCCTACTCTGACATGACTGTTTTTACCAGGCCTA TTCTGTGAACTAGCTTCAGACTATGATTGTGGATGTTTCCGAATTTGTGTCCACTTTTGTTTCTTTTTAAAACTATAGCACATTTGGTTTCTTATTTGTC GCCTACTGATTTCTTGTTATATATTCGAGTAGACATTCGTGCGCCAGAAAATCACCCTGGAATCTTCCAGCTCCACTTCCCGTAACTTGAAGCAAGGATC GACAGTTGTGGACAATGTAACCATAGACAAGGGGATTGCAGCAATACAGAATAATCGCGACATTTTGTGTAGTGGAGAAGTAATGCACACCGATTCCGTT GACGTTGTAAACGAGTCAAAATTTATGAATCAGAGAAATGGAAATAGCTCTTGCTTGATGGATTTAGTGAACCAAAAGGATCCATCCAAACAAACTCACA ACATGAAAATGCTGAAAACTCCTTCCTTAGTAAAGCATGACGAAAATTTGTCTTCCGATAAATGTGGGAGGAACGAAAGAAAGGAGTGCATGGATAAAAC ATGTGATGAATCTGGAAAACTATTACATTCATGTTCAAAGATCAATGAGAATTCTACCGGTGTTGGTCCACTTCGATATGCTCTTCACCTCCGCTTCATT TGCCCTTTTCCGAAAAAGACTATAAGATCAGTTCAAAAATGCAGATCAAGTTCTCTTCCAGAAAAATCTGGATTCAACATGGAAGGGGAAAGGAGATTTT ACTTATATAATGATTTGCGGGTTGTGTTCCCTCAACGCCATTCAGATGCAGACGAGGGAAAGTTGAATGTGGAATGCCATTTTCCAGAAGATCCAAGATA CTTCAAGATCAGCTGAAAAATCTGGTTTACCTCTCCTCAGAAAGCTTCATATTTTTGCCTCAACTCTTTTCACATTATATCACATGTTGGTCATGCCCTT TAGAAATGGACAAGGATCTGTTGTCCCCAAGCCTGTACCAAAGTCTGTCCCAAACTAATTACATTATGCACATCAGTTAACAAAGTTAAACATTTATGAT TTTATATATTTTTCCTTGATTATGATTGGCTTGGTACGTGATTGGGGACATGGTTTGGGACAACAGATCTCCAAGAAATGGCACTAACCCTTTTGTAAAT ACTTACAATTTCAATAATGTGATGGATTAATACCCAATTACCATCGAATCAAGTTGATTAAATATTTTGTGGAGCATGGTTTCCCTCTTAATCATTTTAT AGACCCAAATTAGCATGTACCTTAAGGGTATCTTTAGATTAGAATTTAGAGGGAACATTAGGGACATGAATTGAGAAAAAATTCATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_171387; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415943
| Blastp | Protein FAM214B from Pongo with 30.15% of identity |
|---|---|
| Blastx | Protein FAM214A from Homo with 31.65% of identity |
| Eggnog | family with sequence similarity 214, member(ENOG41115V6) |
| Kegg | Link to kegg annotations (100172463) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453495.1) |
| Pfam | Domain of unknown function (DUF4210) (PF13915.5) |
| Rfam | - |
| GO | - |