Ll_transcript_455172

• Id Trinity: TRINITY_DN49700_c1_g1_i2
• Name Transcript: Ll_transcript_455172
• Sequence: GTAAATTTAACCTTAAAACAAGAAAAAACCAAGCAATGAAGAACTAAACCACTTAAGAAACACCAAATCTTTTATTCGGCTTCATATTTAGACCTACCAC CTACCCATTTTTGAATTTTGTAAACAATCTCTATGGGCCAAACCTGGGTACTAGTTGTTAGTGACTACTGTCTTAATCTCTCACCATCACAATTGTGCAA GAAGTTCAACCTTAACCTCTTGTGAGAGCATATAGTGAAGTGGAATTTCCATGGAATCTGCATGAAAATGAACTTTCCAAATCTGGGCTGTGCTTAGCTT TTTTTGCCATCTTGATCTTCTGCCCAAGTTGTTGATTCTGGGTCACTCTGGTTACATTTTCAAAGCTCTATTAGTTTGGGCAACCATTCATGGAATTTTT CTGAAATGACTCTATTTTTTCGTACTACCAAGGGTATCCTTCACCTTATGGATAAAGACTTTCTCAACCAGTGTCACTCACAGAAGTCGAAGAGATACTA AGATATTGCTATCACCTATAGCTTAATGTTAGTAAGGTTAGGAATCCTAGTAGCTGCTTCAATTGCAGCCTATAAAGTTAAGCACCTCAATTTGAATACC TCAAAATCAGAAAATGAAAAATCAAGGTTTGGAAAACAACAAGATGAGTGCACACAAGACCAAAAACTCACTTGTTCTATTGGTGTTATCAGTGAGGAGG ATAAGGAGAAGGAAGAGCAAGAGGAAAAGGTTAAGTTAACTAACAGCATAGTCTATCGAGCTAGTGATTATGAAGATGATATTCTACCAGAATTTGAAAG GCTTCTATCGGGGGGGATTGAGTTTCCATTACACAATGAGAAGACGGACGATGCCAAGAAAGGCAGAGTTTATGAAACTGTAATGGCAAGCGATGCCAGT GAATTAGAATATTTACGGAATCTAGTGAAGGAATTGGAGGAGAGGGAAGTGGCACTTGAAGGTGAATTGCTTGAGTACTATTGTTGGAAGGAGCAGGAAC CTGATATTCTGGAGTTAGAAAGGCAGTTGAAAATTAAGACCGTAGAAATAGATATGCTTAATGTCACCATGGATTCCTTGCTGGAAGAGAGGACGAAGCT TCAAGAAGAGCTCACACGTGAAGCTTCCGCGAAGACAGAACTTGAGGCAGCCATAAGCAAGATCAAAGAGCTGCAAAGGCAGATACAGCTTGAGGCTAAC CAGACAAAAGGTCAGTTGTTGTCGCTCAAACAACAAGTTTTTGGTCTAAAAGCAAAAGAAGAAGAGGCTGTCAAGAAAGATGTGGAAATTGAAAAGAAAT TGAAAGCTGTGAATGAGTTAGAGGTTGCAGTTCTGGAGCTTAAGAGGAAAAACAAAGAACTTCAACATGAGAATCAAGAACTAACAGTGAAACTCAATGT TGCTGAATCTAGAGTTACGGAACTCTCCAATATGGCCGAGAATGAAATGGTTGACAAGGCAAAAATGGAGGTCAGTAACCTGAGGCATGTGAATGAAGAC CTTCTAAAGCAAGTGGAAGGACTCCAGATGAATAGATTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAATGCATGCTTGAGATACGAGCTCG GGTATTATCAGGCACCTCCAGGAAAATTATCAGCCCGTGATCTAAATGATAGTCTGAGCCCAAAATCACAAGAGAAGGCTAAACAGCTAATGTTAGAATA TGTTGCATCAGGACACGAGCAAGATGACACGGATCTTGATAGTATCTTATCCCATCTCTCTTCACCGAGCAGTGAAGATTTTGACAATACAACTAGTGAT AGCTCTACTAGCAAATATAGTAATCAAAGCAAAAAAACTAGCTTAATTCAAAAGTTGACGAAATGGGGTAAAAGTAAAGATGACTCAAGTCGTCTTTCAT CATTAGTCAAATCTCTTTCCACAGGCGCTCCAAGCAGGAAGTGTATGAGCAATGATAAACAGAGAGGTACATTGGAATCCTTGATCCTAAGGGATGATGG TGATACCATAGCCATCACTACCTTTGGGCAAAAGTATCAGGAACCTACCGATTCTCATGAATATCCAACTACCATAAGAAAAGTTTCATCCAGTGACTCC TTGAATTCGGTTGCAGCATCTTTCCAATTGATGTCTAAGTCAGTTGATGGGTCTCTGGACGAAAAATATCCTGCATATAAAGACCGCCATAAATTGGCCT TAGCAAGGGAGAAACAAATTAAGGAAAAGGCTGAGAAAGCAAGAGCACAGAAGTTTGGTGACAGTTCAAATTTGAATATGACCAAGGCTGAAAGAGAGAG GCCTAAATTTTTGCCACCAAAACTTACTCAGATAAAGGAGAAGGCATATGCTTTTGGTAGTTCAAATGATCAATCTGACAGTGGTAAGAGTCTTGGTGAT CAAACCATTAACAAGATGAAGCATGCCCACATCGAGAAAAGGCCTCCGAGAGTACCTCGGCTACCTCCCAAACCATCTGTTGGTTCTTCCGGTAGCACAA ATTTAAACCCTTCCAATGAAGTACCATGTGCTCCACCTTTGCCTCCTCCTGCCCCTCCCCTTCCCCTAGGAAGCCTAGCAAGAGGGGCAATGGATGGCGA CAAAGTTCATCGGGCTCCTGAGCTACTTGAATTTTATCAAACATTGATGAAATGTGAGGCAAAGAAGGATACTTCATCGTTAATTTCTTCAACAACTAAT GCATCTGATGCAAGGAGCAACATGATTGGGGAAATTGAGAATAGATCATCATTCCTCTTAGCTGTGAAAGCTGATGTCGAAACACAAGGTGGTTTTGTCT TCTCCTTGGCAAATGAAGTTCGAGCAGCCTCCTTCTCTAAGGTTGAAGATCTAGTGGCCTTTGTGAACTGGCTAGATGAAGAACTTTCTTTTCTGGTTGA TGAACAAGCTGTTCTCAAGCATTTTGATTGGCCTGATGGGAAAGCAGATGCACTGAGAGAGGCAGCTTTTGAGTATCAGGATCTGATGAAATTGGAGAAG CAAGTCTCCACCTTCATTGATGATCCCAAACTTCCATGTGAAGCTGCCTTGCAGAAAATGTACTCATTGCTTGAAAATGTGGAGCAAAGCATATATGCAC TCCTACGGACAAGAGATATGGCAATTTCTCGGTACAAAGAGTTTGGAATCCCAGTAAATTGGCTATTAGATTCTGGAGATGTGGGCAAGATCAAGCTTTC TTCTGTACAACTGGCAAAGAAGTATATGAAACGTGTTGCATCTGAACTTGATATGTTATCCGGATCCAATAATGAACCAACACAGCAGTTTTTGATTCTC CAGGGCGTACGTTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGATTTGATGAAGAAAGCATGAAGGCTTTTGAAGAACTAAGGAGACGCATCAATACTC AAGCTGGTGAAGATTATTAATGAGAAACATAGGGTGACTATCAAAAGATTTTTTTTCTAATCTTTTTTTAACAATAGAAGTTTCTTTTATGATATTCTCA GCTGTAGTTCAATTTTATTATAATATACATGTTGGATGCTATGCAATGATAATATAATCATATTTTAGGACTTGGTTTTGTTTCCAAGATGGTTCATGCC CCCTTGAGCAAGAAATGAGATTCAAGTTGAACAATATTTAAC
• Tissue: pods
• Gene name: LI_gene_171535;
• Additional information: details;

Expression of Ll_transcript_455172

FPKM

• PAB: 0.5
• PNAB: 7.7
• PS1: 9.8
• PS2: 7.1
• PS3: 10.7
• PW1: 3.2
• PW2: 1.8
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455172

• Blastp: Protein CHUP1, chloroplastic from Arabidopsis with 61.46% of identity
• Blastx: Protein CHUP1, chloroplastic from Arabidopsis with 61.81% of identity
• Eggnog: Chloroplast unusual positioning(ENOG4111F63)
• Kegg: Link to kegg annotations (AT3G25690)
• CantataDB: Link to cantataDB annotations (CNT0000365)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428906.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;