Ll_transcript_455158

Id TrinityTRINITY_DN49725_c0_g1_i11
Name TranscriptLl_transcript_455158
SequenceGTGTACAGTTTTTTTTTATTTTATAATTTATAGTGGCGATTATAGAAAATAAGAATCACTATTTAGTCATGAAGTTCCAAGTAGGAAATTTGATATTAAT GCCTCTGCTTCATTTTTGTTGTGTATTTTTTTTTTTGTTTTCTCTAAGGAGAAGGTTAATTCTCCTTTTTTTTTTGTACTGTTTCCTTCTTTCCAATGAA TTTCTTCTTTTGCCCTAATTCCAAAAAGAAAAGGGTAGAAGTTATTAAAAATAAAAACCTGATATTCCTTCTTACTATACATTTCATATATGCCTGAGCT GATTTACAGGAGTTAGATCAAGTGAATAGCATATCTCTAGCTGACACAGCATCAGTTCCCCCGTCTAGAAATGATCTGATCAGTACTTCAGAGCAAGTTT TGGTCTCAGATACTCCATTACATTCATCTCCAGCACAGTTACAGTCCCTTAGGTCTTTCGATTGGATAATTTCTGAGGTGCAATTTTCTTTTCAATACCT TACGAAAAGGAGAGATAAGAGGCTTTCTTCATTGCCATCTAGTAAGCATAGATGTGGAAAAGCTGATGTCAAAAGCTGCTATACAGCTGCAACTCTGAAG CTTTCACAACTGGAAACTGAAGAACAGAAAGAAAAGGCTTTAGCTTTAGCAACTACTGAACTGGAAAAACTTTTCAAGAAGGAATACTTCAGAAGCATGA AGGTGATTGGGCAATTCAATCTTGGATTTATCATTGGTAAATTGGATCAAGACTTATTCATCGTAGATCAGCATGCTGCTGATGAGAAGTACAATTTTGA ACGTCTATCACAATCAACCATCTTAAACCAACAGCCTTTGTTTAGGCCACTAAGAATGGAGCTATCCCTTGAAGAAGAAATAGTTGCTTCAATGCACATG GATATAATCAGTACACAAATGTTGCTGAAGCTTTGTCTTTTACTTCTTCATTTAATTAACTGGGTTGTCAGAATGAACTGCCAGATGCTTGTCTTCTGCT TATTGGAAGAATGGATTTACTTTGGAAGAGGATCCAAATGCACCGCCTGGATGCCGTTATAAGTTAACATCTGTCCCCTTCAGTAAAAACATAATGTTTG GAGTTGAAGATGTTAAGGAGCTGATCTCTACCCTGTCTGATGAGCATGGGGAATGTTCCATTATTGGTAGTTATAAATTGGATACCTCAGGCTCTATTTG CCCTTCGAGAGTTCGTGCAATGTTGGCTTCCCGTGCATGTCAATCATCAACTATGGTTGGTGATCCACTTGATAGAAATGAAATGCAGAAGATAGTGGAG CATTTGGCTGAACTAAAATCACCATGGAATTGTCCCCATGGCAGGCCAACCATGCGCCATCTAATTGACTTGACTACAATTCATAAGAGCTCAGAACTAA CAATGTAGAGATGTAGATTCGTTATGAACTTTTGATCTAATTGCCATTGGAACAGTAAGTAACTCTGTAACTTATTTTGTACAATTACTGTGTCCGAAGT GTTGGTCTTGAAAGAGTATGCTTGGTGCAATAGTGCTGAGCTTCTTATTGGGCAGTCTTACCTCTTGACATTGTGTTCATTTGCTAATGGTGTCTTTTTA AATGCTTTACCATTTGAGTCAACATATCATTTGTACTAAAATAATTTGAAGTATAATAAAAGGGGAGAAACATATGAATCTATATATGATAATTAATTGA GTATAATGATCTTAACTATTCAACATCTTCAATGATTTAGATTGATGTTCATTATGCAAAAATGAGGAACTCAACCCAGTAAAAATTTAAAACATTCAGT TTCAAAAAAGTACCAACATTAATTCTCAAATTTTAGTGAGCCAGCTATAAGTACTCTAAAATTGCTGATAGATTCACAACAACAGGAAAGTTTTTTTCTA TTAATTACAAAGGCAGTCGAATTCTCAAAAAATCTAATGTCTAAGTGACCCAGGGGATATCCAACAATTGTACTACTGGAAAACAAATAAGCTTTTTAAA AATTGAATTAAATGAATATCTACTCTGAAATATTCAGCAATATTTTTAAATAAGATTTTGTAAATTAATTATGACATTTTTTAATCATGTTAAAAAATGT AAAAAAGAAAATGCAGGTCGAGGAGGCTTCATAGCGCCTTAGTAGTAATGATATATAAAAAAATAAAAAATGAGAAGAGAAAGTGACTCCACACTTCACA ACTTAGTTGAGTGAGTTTCCAATAGCACTTCATAGATTGTTCGAAAGCATTGAAAATTATTAGGTTAGGTTTGAATCATTGTATTTAAATTATAGAAGAA AAGAACGAGAACAACACAATAGCGATCAACCTCTCTCTCTTCACAATAAAACGATTTACGTAATCACACAGCATTTCCACTTCAACCTTCGATTTACAAC ATGTTGCCCCTTTCTCTTCTCAAAACTGCCCAAGGGCATCCAATGTTGGTGGAACTGAAAAATGGTGAGACTTATAATGGGCATTTGGTTAATTGTGATA CATGGATGAACATCCATCTCAGAGAAGTTATATGCACCTCTAAAGATGGAGATAGATTTTGGCGTATGCCTGAATGCTACATTCGTGGCAACACGATTAA GTACCTTCGAGTTCCTGATGAGGTTATTGACAAAGTTCAGGAGGAATCCAAGAGCCGCACCGATCGCAAACCTCCTGGTGTGGGACGTGGAAGGGGAAGA GGAGGTAGCCAGGATGGTCCTGGTGGACGTCCAGCAAAAGGAATTGGGCGTGGTGTTGACGAAGGCGGGGCTAGAGGGCAAGGAGGAAGCCGAGGAGGAA GGGGTGGCATAGGTGGAAAGCCTGGTGGAAACAGAGGTAAATCACCCCCTTCATTATTCCAAAATTCGTTCACTGCATGCATGTATACCAACTGTTAGTT TTTCGGCTTATAACAATCGATATGAATATTTTGGCTTCCATCTCTCAAATTTCTTATGAAGGAGTTCAAAGTAGTCCATGCTATTTTCATTTATTTTGCC TGGATGAGCTCCTGATGAATTCATCAATGTAAAAAGTAAATTATTACTAAAGGAACTCAATGTCTTATGTTCCCTTGTTTTGATGTTTAAGGGGAAAACG GGTATGGGAGTTTGAGTTATAGTAGAGAGAAGGTATATGTTAGTAAGTTAAATCCCAATGTAGTTCAACTTTGTGTTGGAATCCTATATCACTTACCTGA GGGTATTATACGCGATCCAATGAATAGCTAATATAAAATAAATCATGTCCCCATTCTTCCATCCCTTCCAACATGTTACGTAGCATACATCGTGTGAATG AATCTCGTTCAATATTTTTGCTTATTCTGATAGCTGCAGGGCGAGGCAGGGGTTGATTTGAGTAAGTGATGTTGGAACTACTGCAGTTTGATGAGTTGCT ACTTTTAGAGCCATTGGTGCTCGTTCATCAAATTTGGCCGATTCTGTTTCCTGTGCATACTTGGATTTTATTTTTTCGATGTTTTTCTTGCGCTCGTGGT CTCGAAAATGGCGATATTATAGAATTTACAAAAGCTTCTATTCAGACAATATTTTATAATGCCTTCTCTATGGTAAACTTGCTTTTGTGTGTTAGTTATT GAATAGCTCCAAACTTGCTATGGTTGGAAATGCTCCTTCCCAAAATTGAATTCATGTTCCAGTAATTTTGAAGGCATAGAATATGATATTATTCATTTTG TCATGTTCTATCTTTATTCTTGCCACTGCTGAAGCCTGAACTAATAGAAAAAATAATTTGCTTAGCATGCCTTAAATTTAGGCTATTTGTACTCGATTTT GTGTATTGGCGCTCTCTTACTTACTGCAAACTTTGATTTGCTGAAGTGCGCTTTATTGATTGATATTTTTAATAACATAAATTTCTTTTTTATTGTTTGT AGTGACCTATTTACTCAGTTTTATTATATCTAACAATTTTACAAAAGGAATTG BLAST
Tissuepods
Gene nameLI_gene_171738; 
Additional informationdetails; 

Expression of Ll_transcript_455158

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_455158
BlastpProbable U6 snRNA-associated Sm-like protein LSm4 from Nicotiana with 89.26% of identity
BlastxDNA mismatch repair protein PMS1 from Arabidopsis with 72.5% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441764.1)
PfamLSM domain (PF01423.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;