Ll_transcript_455440

• Id Trinity: TRINITY_DN49788_c1_g1_i5
• Name Transcript: Ll_transcript_455440
• Sequence: GTAACTCTCAATGGGAGACAAATTTTTGGGCAACCTATTAAGGTTAACTGGGCTTATACTAGCAGCCAGAGAGAGGATACGTCAGGTTATAGTTTTGCTA ACACATTACTTTCAACTGTAATTTTGTGGAATGGCAACTTCATCTTTTTCCTTCATCTGGATTCAGGCCATTTTAATATTTTTGTTGGTGATCTTAGCCC CGAGGTGACAGATGCAACATTGTTTGCTTGCTTCTCAGTATATCCTAGTTGTTCAGATGCTAGAGTAATGTGGGATCAGAAGACAAGCCGCTCCAGGGGA TTTGGCTTTGTATCTTTTCGGAATCAACAGGAAGCACAAAGTGCCATAAATAATTTAACTGGAAAGTGGCTTGGAAGCAGACAGATTCGTTGTAATTGGG CTACAAAAGGGGCTAATGTCAATGATGAGAAGCACAGTTTGGATTCGAAGACCGTTGTGGAGTTAGCTAATGGAACATCTGGTAAGATTATGAGTTTATC CTACTGAAAGTTTCTAACTAGCTTCATCATCTTTTTTCTTTATTTCATTTATTTATCTATTCTTTTTGTGGTTTGGTATTGTTTTTAGAAATTATTGAGT CATTGTTTTCATTGAATGGCAGCTATGACATTTGTATCAATTTCTAATGGATGTTAATGATTCATCGTTTTTAAACATTTTTGCTATTAGACATGAAAGT TCATTTCAAATAAATTTTGCCAGGACACTTCCGAATATTGCTTTTCAAGCCGTGATATTGTAGTTTGGTTTATTTTCTGTATGTGCATCATGGCTGATAT TTTTCTAGTTCTTATTTTTTTGCCCATGTATGGATATTTATCAAGCGGTCATTGTGGCCTGATTGTAGATTTGTTTGGCCAATAATCTATACTTCATGGT TAGCTAGTTTTTTAATTGCAGAAGGCAAGGAACTAACCAATGATGATGCTCCAGAGAAGAATCTTCAATATACCACTGTTTATGTTGGCAATCTTGCTCC AGAGGCAAGGATTAGTATTCTTTGACATTTTTTTTACCTTAATGGTTTTCTTATTTGTCTGATAGCTATGCACTAATACTATATCAACAGCCAGTTAAAA TTGTGAGCTCTATAAAATGTGTAGCACAGTCCTGTAAATTTAGTTTGTTCTAAACTTACTTTCTAGAAGTTCTTATAGGCAGTGAAATTGCAGGTTACTT CTGTTGATCTTCACCATCATTTTCATGCCCTTGGTGCTGGGACTATCGGAGATGTTAGGGTGCAACGAGGTAAAGGTTTCGGGTTTGTGAGATACAGTAC ACATGCTGAAGCAGCTCTTGCTATACAGATGGGTAATGCTCGAATTCTATTTGGCAAACCTGTCAAGGTACATTGCTGTTGCGAGATATCTGTTGATAAT ATTACTATTTTTTATGTCCTATTGTTATAGCTGTGTATAATTTTTGGCTTTTTGTTCAGGGGTGATTTCATGACATATTTCTTGGGTACAGTAGAAAATG TTTTTTCTAACCATTGCTCTAAGGATTATGTTAAGAAAAAAAGGACTGCTTTCTGAGAAAATTACATACATAACTCTTGAATCCTTTAAATAACCACTTC AATGCCTCTTTCCAATAAAACCATTTTGTTCCTTAACCATGGCAATGGTTAGCAAAACCATTACAAAAAATGTGCTGTCCTCATATTTCTGCCTTGTGTC GAAAGAGTTCATGAAATTGCAATTATCTGTCATATGGCCTAATATTTTTGAAGTAAAATGCCAATCATGTTCTTGTCCTCCTTTATTTTTCACAGGCAGT TAAATTGGAATTATCTTTTTTAAGAAAAGTAAAATGCCAATGAAGCATATATTTGAGCTTTCATATTCCTATGGCTCTTGGAAATGCATCTAATCTTGTT AGTTGACATGTTGCAGTGTTCATGGGGTAGCAAGCCTACTCCTCCGGGTATAGCCTCAGCTCCTCTTCCCCTACCTACTGCTGCTGCTGCTTCTACTCAT GTGCCAGGGTTTTCACTTGCCGAACTTGCAGCATATGAACGCCAAATGGCTTTGAGCAAAATGGGAGGTGTACATGCCCTTTTGCATGCGCAGGGTCAGC ATGCCCTGAAGCAAGCAGCCATGGGAATGGGTGCTCCCGGGGTTGGTTATGATGCAAGATTCCAGGGTGTTGCAACTTCCCAGCACCCAATGTACTATCA GTAAAATATGTTGTGCAATTCCCTACCTTAAATATCCCTTCCCTCCTCTCCCTGTTTTGATCTTCATTCTCTCCTTTCCTAACATTGCTCCCTTTTTGGG TTTGTTTATGTATTACTATAATCATTGTCTGTTGTGTGAAAGCTGTAGGAGCACTGTCAATAATGTTTTTTTCTCCTGTCTTCCTTTTTGTGTGTTGAAA AATGAAGCCATTAGCCTGTTGCAAGTGTAGACACATATAGTTTGCATTTAGTACATTTTTCAGGCTTGTTTACATATATCATGGTTTTGTCTTGGGATTT TCACATTCATGTGTGTTTTTTTAAAGTCATTCTTAAGTCTAACCCTTATGTTAGATACTTAGAGTTGTCACTTCAGGAGAACTTCACCTGATCACTAATG CGCACTGACTGTCAGGCTCATCTTATTATGCCCAAGCATGATAGAAAAACTCAAGCATGCGGCTAAGAATACCACTCAGCTTGTAACCCAAGCATGATAA CAACAATGTATGCAAAGCTTATAGAAAAACTTGTAAAAGTAATGTTGCTCTATCTGGATATATGAATATGAGAGCAAAAATACAATTTGCTATTGGGGCA TATACCCTCGAATAATAAAAAGGATTCCCAAGACCCAAAGCATGAAGTAACTGCGAACATAAT
• Tissue: pods
• Gene name: LI_gene_172222;
• Additional information: details;

Expression of Ll_transcript_455440

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455440

• Blastp: Oligouridylate-binding protein 1C from Arabidopsis with 51.92% of identity
• Blastx: Oligouridylate-binding protein 1B from Arabidopsis with 66.25% of identity
• Eggnog: TIA1 cytotoxic granule-associated RNA binding(ENOG410XQ8U)
• Kegg: Link to kegg annotations (AT3G14100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443470.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;