Id Trinity | TRINITY_DN49805_c4_g4_i5 |
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Name Transcript | Ll_transcript_342464 |
Sequence | GGTAGTTAGTTTGTTTCTTTCTCTGTTTTGCTTTCCCTATTTAAGGGACAAGCTTTCTTTCTTGTAATTTAAGTTTTCAGTTTTCATTATTCAATAAAAG AAGTATTCTTTCCTATTCCTTCTTTCTTTTCTATCTTTTTACAATATGTGTGTAGTATAAATTGATTATTTGCTTCCCCAAATATCCTTATCCCGGCCAT CCTGCTATCCGCTATCCTGCTTTCCCGTTTTTGGGGTCAGCTGGGATGCTCTGGGGACTGGGATTGATTACTTAGTGGACACCATTAAATGTTCAATCTG GGTATAATAGGTTACTCATCAAGATATGTTTTTTTATTGGTAAAAATTTACATAATATGAAAATTTTCCGTCCATGTTTTTCTAAAGTGCACATTTAGCT ACCGTAGAAATAATATAACTACTAAATAATGATTCAATATCACTTGGTGACTGTGATCTCTTGATCTGTATGGTGCATTTTTTGTTGCTCATTTCAATTC AACAATATGAATTGATGTTCAAAAGCTCTTTCTATTATGTATATTATATTCCTTTTTATAAAGAAAATGATAATCTTAGCATTAATATGCACTTACTGAA ACTTCCAACATACCAAGTTTTGGCTCGTACACAGGTAGAAGTCTTTCTTTAAAGGAAGCATGTGTTACTCATACTTTGTCAAATTTTCATACAATTGGTA CCATTCTATAGCAGTATACTTCATATCTGTACAGACCATAACTATAGGCTATATAGTTGATCAACGCATGAAATATTCCCTCTTCATGTCAAAGTGGGCA TGTGTGCATGACACTTTTCGGTGTGACATGGCGGTCCATAGCAGTGATGAGTTAAAGGTTGCAACTTAAGAGACAGATTGAGGTTTCTGTTGGCATGCTG AACAAGGTTGTGGTGGTTTGCCTCCTTGTGAACCTGTGTTTAAGGATGCTTGACCTGTTCTGCAGTTATATTGGCAAAATTCGCTTCTCTCATACCTTTA GGGAAGACAACTATTTGGCAGAAAGTGTAGTTAACATGGCTCATAATGCTACAGATAGTCATGGTCTCATGGAATTCTCGTCATTCCCTAATGCATGCTT TCAGTGTTTCGTAGATGACATGCAAGGCTTTTCCTTGCCTAGCTCCCTTTATACTTTTGGTATTTAGCTCCTTGTATTCAGTAAAAAATCAGGGGTGGTG AAATAGTCTATTTTGTTGCACTGGAGCAATTATTAATTAGTTATTATTGCCCTTTTGTGTCGTCAATGTGCGAAAATGAAGTATGGTGCAGGTGTTCTGT GTATAACGCATTATTTCTTAATGAAATAGCTGAACATAATAGTGAAGTGCTTCATAATTTCATAGATAAATAGAATGTTATGCCCTTTGAGCTTCACAGT GTTTTCACCTTTGGTTTTTCCGTTGCATTAACATTGTAATTGTTAATTTCTTATTCTTCTCCGGTTTCTGATATGTTCTCATTTGTGTCAGAACCATGTT ATGTTGCTTTTCATGATGAAGAGTGGGGAGTTCCTGTTCATGATGACAAGAAACTGTTTGAGTTGCTGTGCTTCTCTGGAGCCTTGGCCGAACTTGCATG GCCCACCATTCTCGGAAAAAGGCAGTTATTCCGGGAAGTATTTTTTGATTTTGATCCATGCGCTGTTTCAAGAATGAACGAGAGAAAGGTAACTGCACCA GGAAGCCCTGCCAACTCATTGCTATCAGATCTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATGGAAGAGTTTGGTTCCTTTG ACACATATATTTGGAACTTTGTGAGCCATAAGCCTATAGTGAGCCAGTTCCGGTATCCACGCCAAGTACCAGTCAAATCTCCGAAAGCAGAATTCATTAG TAAAGACCTAGTAAAGAGAGGATTCAGGAGTGTAGGGCCAACAGTGATATACACATTCATGCAAGTGGCTGGTCTAACTAATGATCACCTTATCAGTTGC TTCAGATTCAAGGAATGCAGCGCCGCGAATGCAGAAGCAGTGGCCGAAGAGAGCTCTCTCAACTCTGAGGTCAAAGAGAAAGCAAGTGAGGAGGAGCCAT CAGAAGTAGGTATTTTGCTAGCTGTCAACAAATTGAGCTTCACTTCAAAGTAGTATGAGGAGTTTGGTCAATGGTTACATTGTTAATGTGGTAGTTGTCA AGTTGTGGAGTGTACAAAACCCAAAAGGCATTTTATTAATTGACAAAGCA BLAST |
Tissue | pods |
Gene name | LI_gene_172353; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342464
Blastp | DNA-3-methyladenine glycosylase 1 from Escherichia with 40.35% of identity |
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Blastx | DNA-3-methyladenine glycosylase 1 from Escherichia with 40.59% of identity |
Eggnog | DNA-3-methyladenine glycosylase activity(COG2818) |
Kegg | Link to kegg annotations (JW3518) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427103.1) |
Pfam | Methyladenine glycosylase (PF03352.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |