Id Trinity | TRINITY_DN49805_c4_g4_i7 |
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Name Transcript | Ll_transcript_342470 |
Sequence | CTTGTGTAATACTCTCATTAAAGCATCTTCCTTACTCTCTTGCTTCTTCTTATTAGTTGCTTTCTCTTTGCATTTTCAAAATTCTCTTCAACTTTATCAT TCTCTACAACCAACTTTCTCACTATTCTACACTCCATTACCATTTTCCCCCACTTTCACTCAACCCCACATAACAATACTATCTAAAGTTTCCTCCTTTT TCACTCACAACTACAAAATCAAATATTTTTAGCTCAATTTTTGAGTAATGCACCTTTCATAAAGTCTATTTCTCTTTCTAGGGTTTTGCATTGCTTAGTC CCACTATTCAATTTCATCAAACCAGAATTCCAATTTATTTTTTTTCAAATTTAAACCAACTCCAGTTTCTCTCCGTAAGAGGAAAAAAAAAACCTTTTTT TAGTAATGCAGCTGAAAAAAATTCATTTTTTAGGGTTTTGCATTGTTTAATCCAAAACCCACCATTGAAATCCATCACATCATTCAATTTCATCAAACGG GGATTTCATATTTTCAAACCAAGTTTAAACTTTCTCTCTCTGGAAGAAAAAAAAACTTTTTTTTTTCAATTGTGTGTGTGAAAGCCTTAACTTTTGAAAA TTTTCATATTCAGCATTGACCTTAAAGAGTTTTCAGAAGAAGGTTCTAGAATGTCGGGTCCACCCAGAATTCGATCCATGAATGTAGCCATCCGAGAAAT GGAGAAGAAACCAGTGAAGAACTCAGTGCCGGAAACAGAGAAGAAGCCAATGACACTGCCTTTGATTTTGAAGCAGCAAGATAATCATCATAACCAAGCT GTGCTGAAAAACATGTCCATGAATGCTTCATGCTCCTCCGATGCGTCGTCCACTGATTCTTCCACTCATAGTGGTGGGAACATGGTGGCGCAGCGGCCGA GGGTTGCTACTGTGCCTGTAAGGAAGAAGGTTGGGAAAGTGAGGATTGACAATGTCGGTGGTACTGATCGTGTTGATGAGACTGATTCAAATGATAGCTT GCAGAACAAGAAAAGGTGTGCTTGGGTTACACCAAATACAGAACCATGTTATGTTGCTTTTCATGATGAAGAGTGGGGAGTTCCTGTTCATGATGACAAG AAACTGTTTGAGTTGCTGTGCTTCTCTGGAGCCTTGGCCGAACTTGCATGGCCCACCATTCTCGGAAAAAGGCAGTTATTCCGGTACTGATAATCGTCCC TGAGATATATAGGTTGGATTTAATTATATGGTTGGCATAGAACAAATACACATAAAAAGCCGGTGTACTTCTATTTAGGTTTCGATTGATTTCAAAATTT TGTATGTCTAAAATGCAATAACAAATTTTAGGATTTAACTTTGGATTAATTGTTGTGATATATCGCCGAGCACAGGGAAGTATTTTTTGATTTTGATCCA TGCGCTGTTTCAAGAATGAACGAGAGAAAGGTAACTGCACCAGGAAGCCCTGCCAACTCATTGCTATCAGATCTCAGGTTGCGATCAATAATTGAAAATG CACGTCAGATGTGTAAGGTAATGGAAGAGTTTGGTTCCTTTGACACATATATTTGGAACTTTGTGAGCCATAAGCCTATAGTGAGCCAGTTCCGGTATCC ACGCCAAGTACCAGTCAAATCTCCGAAAGCAGAATTCATTAGTAAAGACCTAGTAAAGAGAGGATTCAGGAGTGTAGGGCCAACAGTGATATACACATTC ATGCAAGTGGCTGGTCTAACTAATGATCACCTTATCAGTTGCTTCAGATTCAAGGAATGCAGCGCCGCGAATGCAGAAGCAGTGGCCGAAGAGAGCTCTC TCAACTCTGAGGTCAAAGAGAAAGCAAGTGAGGAGGAGCCATCAGAAGTAGGTATTTTGCTAGCTGTCAACAAATTGAGCTTCACTTCAAAGTAGTATGA GGAGTTTGGTCAATGGTTACATTGTTAATGTGGTAGTTGTCAAGTTGTGGAGTGTACAAAACCCAAAAGGCATTTTATTAATTGACAAAGCAAAATGGAC CTTTGGCAAAAAATTTCAATTGTCATGTATTGCAAGATATACTGAAATAGTCATTGTTGCAGTTTGCCTACCTTTTTCTTTTGTATTTTGTGGTCATCAA CACCCTTTTATACTTAGCTATGACTGGACGGTACCATATCCAGTTTTAGAGCCAAAAGATACACTTTTAATATGGTTCTAAAGTCTTTCATCTACCTTCT TCCCTTTCAAAATTTAACTCGCAAATGAACCATTAAGG BLAST |
Tissue | pods |
Gene name | LI_gene_172353; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342470
Blastp | Probable GMP synthase [glutamine-hydrolyzing] from Helicobacter with 48.65% of identity |
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Blastx | Probable GMP synthase [glutamine-hydrolyzing] from Helicobacter with 41.6% of identity |
Eggnog | Catalyzes the synthesis of GMP from XMP (By similarity)(COG0518) |
Kegg | Link to kegg annotations (HH_1444) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427103.1) |
Pfam | Methyladenine glycosylase (PF03352.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |