Ll_transcript_342607

• Id Trinity: TRINITY_DN49851_c0_g2_i6
• Name Transcript: Ll_transcript_342607
• Sequence: GATAATTTTGATAGTTTGAAGTTGTTGTGTTATAGCAATGGAGTGAGGAAATTGATTGCAGAAGTGAGTTAGCTGCACTTACTCAACGATAGTGGGAAAT GAGTAAAAAGCTTTCCGCTTTCATTGTCTCTCTCCAAATATAGAAACCCACTTTCACAAAACCTCTTTCAATTTCTATCAACCCTCTCTTTTCCTTTCTC TTTCTTTCACTATACTAATATCTCTTCTTTTTCCATCCACTGCTTAACCTGACTTAATACTCTTCACATTTACCATTTTAATCACTTTTTTCCTCACTCT CTCTTTATTTTAATCACTTTTTTCTGACTCAATTAAAGTGGAATTGTTTGGCTTCTACTTTGTTTTGAACTCTGATTTTGTTGAATTTCATGTAATGGAA TCTTGGATTTATGTTTCTGAAGAAAAAGGGTATGGCTCAAATGACACACTCTCCCCACCTAATACCGTTGGGAGGAGTAAAAGTTCAATCTTGGGATGGG AACTGAAAACCCCATGTAGCTTTTCTAATGATTTGTTAGCCTTGGGTCATCAAAACATTGATAACCATCAATGTTTTGAGGATTTGGGGTATCCTGAAAT GTTGGGGAAGAATTTATATGATGATCTGGATGGTGGACATGGTGCTAGAATCACTGCTACTACTGTTATAGCTGCTGTCCCAAATCCATTTTCTGCAAGA GGGGACTGCAATTTCAGGCTTCCGAACTCTATCGGTAGCGATTCGTTCATTGATTTGAAGCTGGGACGATTTGTTGATCATGGGGAAGCAATTGATGCAG CATTTTCCAAAGGAGCACCAATTATGTCATCTTCGGAGTCACCAATACCCTCAAAGCGAGTAAGGGCTTCGGGTTTGCGCTCGCAGACCGTGTACTGCCA AGTCTATGGCTGTAACAAGGATCTCAGTTCCTGTAAGGATTACCACAAGAGGCATAGAGTTTGTGAGGTTCACTCTAAGACTTCCACTGTTATAGTGAAT GGCATTGAGCAAAGGTTTTGTCAGCAATGTAGTAGGTTTCATTTGCTGGCAGAATTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGCCATA ATGAGCGTCGACGAAAACCACAAATGGGTATTAACTCTGGAAGGGCTGGGAGGTTGCTTCAGCCATGTGGTGATAGCAGATTCCAGGGGACCATGCTAAC ATCAGCATCTTATATCTGCCCAGATATGCTCCCTAGTCGGGCCATGCCTTCTGAGAAATATGAAATGAGTGGCTTCTGGAGACCTAATAAAGCAGAACAT GGGACGGGTTTTAAGCATCTTTCTTCTATACCTAGCTCCAATGGATATTCTCAGTCAAGATCCCTATTTCCTTCACATAACCAAAAACAGTTTCCTTTTC TTCATGAAAATGGCGCTACATCCACTACAGGAAGCATCTTCTGTGACAACAATATCCAATATCCACCTGTCCTTGGGGCCCAAAATTCCGGGTCAAAATC AGTATACCACCAGGATAGTTCCTTAAGAAGTGAGGACTTCAATGTTTTTGATACAACATCAACTGTTCAAGGACTACCCGGAATTTCAGACTCTTGTGCT CTCTCTCTTCTGTCATCTCAATCCCAGAACTCATCAAGCCAATCATCTGAAATTCCCTTGTCTCACTCTTTGGTTTTTCCAAACAGCCATAGTCATCACT ACAACATTAATCACGTCTCCGAAAAGGTGGGAATAAGCTCGCTTACTTCTTCAAGCCAGGTGTCAGATAGGTTTCCATCAGAAATGAATCCTGTGGATGG AAACAATCTTAATCCTGTGCTGATACCAGACAATGATGCTGATATTGTAAACTTTGAAATGGCAGATGATATTTTCCAACGTCCAGATTTTCTGAATGTG AAAAACCGTCTTTCTTGTGAAGACGGCACAACTATTGACTTGCTACAACTGTCGTCGCAGCTTCAGCATGTTGAGCACCACAGGCAATCCTTGCAGATGA AGCAAGAAAATGATTCATTTTGCACTCTCCGAATTACGTAAGGTGGTTTGGAGAGATCTACTTTAGCATTTAGTTGCAGGAAACAAGTTGTGGGGCATGT GACACAGACACAACTATGGCACAGGGAAGGAGAGAAACTTAAGATGGTGCCATTTCTCATTACTGCTAACTATTTAAAGTAGTTTGGTTTATGTCAGTCA CCCACTAAACAAGTTGGGCTTTATCAATCAATATTTATTAGATGGGGACACAATAGCCCCTGTTCTTATTAATGTATGCATCTATCTGGATGTAATAAAC AAAAGCCTGTGATGTATCAAAATCTGCTATTCAGGGCATAAATACTTTAAACAAGCACAATTATTTACTATAACCGATGATGTTTTTTATTTTTTATTTA ATGAAATATTAATTTGCATAAATACTTTAAACAAGCAC
• Tissue: pods
• Gene name: LI_gene_172712;
• Additional information: details;

Expression of Ll_transcript_342607

FPKM

• PAB: 0.9
• PNAB: 6.2
• PS1: 4.3
• PS2: 1.1
• PS3: 2.4
• PW1: 4.3
• PW2: 2.8
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342607

• Blastp: Squamosa promoter-binding-like protein 6 from Arabidopsis with 58.02% of identity
• Blastx: Squamosa promoter-binding-like protein 6 from Arabidopsis with 58.02% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG41120IC)
• Kegg: Link to kegg annotations (AT1G69170)
• CantataDB: -
• Mirbase: mtr-MIR156a (MI0001752)
• Ncbi protein: Link to NCBI protein (XP_019438972.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;