| Id Trinity | TRINITY_DN49854_c2_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_342791 |
| Sequence | GCTGTTGCAGATGGCGGAGTGTCGCATTTGTCAGGAAGAGGACAGCGTTAACAATCTAGAGTCACCATGCGGATGCAGCGGCAGCCTTAAGTATGCTCAC AGAAAGTGCATCCAGCATTGGTGCAACGAGAAAGGTGACATAACATGTGAGATATGTCATAAGGTATGCTTCTTTTATATAAAACTCTCATTTCATAGTG TTATTATAAAAGGGTGGGGATAAGTTACTCCAAGAATAACTCTTTTAGACTTACTTTTCATCTTAGCCATCAATTTCTTGGAAATCTAATGGTGTAGATC TATTCATTAATTCAAATCATTTGATGTATCTAGAATTGATGGTTAAGATGAGGAGTAAGTCTAAAAGAGTTACTCTTGGAGTAACTTGATCCCTCCCCAT TATAAAATGCAAGGATTGGTTGAGGTTGTTGATGGTCATGATTATCCTTACAAGTATAGCTTTGGAGAACAATAATTCCGTACAATGGTATATCTTCATT TGAGGTATATGATATAGCAATGGTATCACAATCGGATAGCGCATAAGAGTCCTAGGCATGTGTGACAAATGGCTAAACGCAATTATGAAAAAATAATATT GCTTCTGAGATTCCCACATTGTCAAAGTAGAGGCATTGCATGTCTAGCTTGTTGCTAGGATTGGGATAAGGTGGAATATGGGATGCTAGCTAAAATATCC AAGATACTAAGAAATTTTAGATGCCTGATATAAGGATGAATTCTGTGTAATGAATCCTTAACTTATTGTGAATCTTAGAATGGAAAAAACTGAGGGTAAC AGGCTAATGTAAGTCATATGCACAATATGTAAAATATGCTTTTAGGAAATTTAACATTTTGCATTGTTTGGTTGTAGTAGTCCACCCGTCACTGTTCAGG TTATTTGTGTCTTTTACATCTCGGGTTGGCGAACATTTATTTGGTTAACGTGGTTATCTTTGCCTCTTTGGATTGAACTTCTCTCTCTATCAGTCTCTCT CTCTCTTTGAGGTTGTCTTTCTCTCTACTTAACGTTTTCCAGTTATATTAAGTTGTGTTTATCTTTGGTGGCAATTCTTTTTTTCTCAGCCCTATCAACC TGGTTATACTGCCCCACCACCTTGTCCACGTCCTGAAGAAACTACCATTGATATTGGGTAAGCTGGATTTTCTATTCAAAGTCTTTATTCAAGTAAGTTG TATCACTTCTATGTGTGTATGAGCATTCTTTCTATTTCAAACTCTTAAGGAATATTAGTTTGAAACTCTTGTCTGCCTCATAAATTATGACCATATTTGC AGTGGAGGTTGGAGAATCTCTGGCACACCTTTGGACTTGCATGATCCTCGACTCTTGGCAATTGCAGAGGCAGAACGCCAATTCTTGGAAGCCGAATATG A BLAST |
| Tissue | pods |
| Gene name | LI_gene_172740; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342791
| Blastp | - |
|---|---|
| Blastx | Probable E3 ubiquitin ligase SUD1 from Arabidopsis with 44.68% of identity |
| Eggnog | (Membrane-Associated Ring finger (C3HC4))(COG5183) |
| Kegg | Link to kegg annotations (AT4G34100) |
| CantataDB | Link to cantataDB annotations (CNT0000254) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445941.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |