Ll_transcript_342781

Id TrinityTRINITY_DN49854_c2_g2_i3
Name TranscriptLl_transcript_342781
SequenceGCTGTTGCAGATGGCGGAGTGTCGCATTTGTCAGGAAGAGGACAGCGTTAACAATCTAGAGTCACCATGCGGATGCAGCGGCAGCCTTAAGTATGCTCAC AGAAAGTGCATCCAGCATTGGTGCAACGAGAAAGGTGACATAACATGTGAGATATGTCATAAGGTATGCTTCTTTTATATAAAACTCTCATTTCATAGTG TTATTATAAAAGGGTGGGGATAAGTTACTCCAAGAATAACTCTTTTAGACTTACTTTTCATCTTAGCCATCAATTTCTTGGAAATCTAATGGTGTAGATC TATTCATTAATTCAAATCATTTGATGTATCTAGAATTGATGGTTAAGATGAGGAGTAAGTCTAAAAGAGTTACTCTTGGAGTAACTTGATCCCTCCCCAT TATAAAATGCAAGGATTGGTTGAGGTTGTTGATGGTCATGATTATCCTTACAAGTATAGCTTTGGAGAACAATAATTCCGTACAATGGTATATCTTCATT TGAGGTATATGATATAGCAATGGTATCACAATCGGATAGCGCATAAGAGTCCTAGGCATGTGTGACAAATGGCTAAACGCAATTATGAAAAAATAATATT GCTTCTGAGATTCCCACATTGTCAAAGTAGAGGCATTGCATGTCTAGCTTGTTGCTAGGATTGGGATAAGGTGGAATATGGGATGCTAGCTAAAATATCC AAGATACTAAGAAATTTTAGATGCCTGATATAAGGATGAATTCTGTGTAATGAATCCTTAACTTATTGTGAATCTTAGAATGGAAAAAACTGAGGGTAAC AGGCTAATGTAAGTCATATGCACAATATGTAAAATATGCTTTTAGGAAATTTAACATTTTGCATTGTTTGGTTGTAGTAGTCCACCCGTCACTGTTCAGG TTATTTGTGTCTTTTACATCTCGGGTTGGCGAACATTTATTTGGTTAACGTGGTTATCTTTGCCTCTTTGGATTGAACTTCTCTCTCTATCAGTCTCTCT CTCTCTTTGAGGTTGTCTTTCTCTCTACTTAACGTTTTCCAGTTATATTAAGTTGTGTTTATCTTTGGTGGCAATTCTTTTTTCTCAGCCCTATCAACCT GGTTATACTGCCCCACCACCTTGTCCACGTCCTGAAGAAACTACCATCGATATTGTTGGAGGCTGGACAATCTCTGGCACACCTTTGGACTTGCATGATC CTCGACTCTTGGCGATTGCAGAGGCAGAACGGCAATTCTTGGAAGCCGAATATGATGGATATGCTTCCTCTAATGCCAGTGGAGCTGCATTCTGCCGTTC AGCTGCTCTAATTTTAATGGCACTTTTACTCTTGAGGCATGCACTTTCTGTCACAGATGCTGATGCTGAAGATGATCCATCCA BLAST
Tissuepods
Gene nameLI_gene_172740; 
Additional information-

Expression of Ll_transcript_342781

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_342781

Blastp-
BlastxProbable E3 ubiquitin ligase SUD1 from Arabidopsis with 44.68% of identity
Eggnog(Membrane-Associated Ring finger (C3HC4))(COG5183)
KeggLink to kegg annotations (AT4G34100)
CantataDBLink to cantataDB annotations (CNT0000254)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445941.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;