Ll_transcript_343895

Id TrinityTRINITY_DN49876_c1_g1_i10
Name TranscriptLl_transcript_343895
SequenceATGCATGGTTTCATGTCAAATGCCAATTATGCTGCCAAGAAAATCACTATGGTGCTTTTCATTAATGTGGTGTAAGGCCCCACTAGATTCCCAGGAGCGA CACTTGTTAGGAGGGGTAGCTATGAACCTCGAAAGAGATTAGTTCCTTATCCAAAAGATAGATTGGTTGAGTGGTCTGCATTGAAGAGAGCTATTGAGAT TGTTTATGCAACAACATTGCCCAAAGCATCTAAACCCTTTGTATATATTTCAATTGTTTTGCCACCTGAGAATATTGATGTCAATGTGCATCCGACAAAG AGAGAGGTGAGTGTTTTAAATCAGGAAGCTATCATTGAACAGATACAGTCAGTGATTGAATTGAGATTGAGGAGTTCTGATGAGGCAAGGACATTTCAAG AACAGACAGGGAGGCAATCTTCATCGTCTCAAATTAATACAAGCAAGGAGGTGATCCTTAGCCCTAAGACACCAGGATCTCGATCACAGAAAGTGCCAGT ACATAAGTTGGTTAGAACAGATTCATTAGATCCTGCTGGAAGATTACATGCTTACGTACAAATGAAGCTTGATGGACATATTGAAAAGTGTTCTAGTTTG AACGCAGTAAGGTCCTCAGTTAGACAAAGAAGGAACCCAAAAGGTTCCTTAGATCTGACTAGTGTTCAAGAGCTTCTTGATGAGATCAATAACAAATGTG ACCCAGGCATGATGGACATTGTAAGGCACTGCACGTACATTGGAATGGCAGATGATGTTTTTGCTGTCATTCAACACAATACCCATCTTTATCTTGCGAA TGTTGTAAACCTGAGCAAAGAGCTTATATATCAGCAAGTTCTGAGCCGTTTTGCCCGTCTCAATGCCATAAGTATAAGTGATCCCCTCCCCTTGAAAGAC TTGATTATATTAGCGTTGAAGGAGGAAGATTTAGATTCAGAATGTAATGATGTGGATCACCTCCAAGAGAAGATTGCTGAAATGAACTCAGAACTGCTGA AACAAAAGACTGAAATTATGGATGAGTTTTTTAGCATTTACATTGACAAACATGGAAATGTTGCTACCCTTCCTGTGATACTCGACCAGTATACTCCTGA CATGGATCGCATCCCTGAGTTTGTGCTTTGTTTAGGCAATGATGTTGATTGGGAAGATGAAAAGAATTGCATTCAAGGAGTTTCAGTTGCTCTGGGGAAT TTCTATGCTATGCATCCACCAATGTTGCCAAATCCATCTGGTGAGGGCTTGCTTTTCTACAAGAAGAGAAAAGTGCTAGACAATTGTACCAAGGAAAATG CATGTGATAGTACTGGGAGCAATGTAGAGAATGATAAAGTTGATCACGAACTGCTTTCTGAAGCCACAACTGAATGGGCTCAGCGCGAGTGGACAATACA ACATGTGCTTTTTCCTTCCATGAGACTCTTTTTCAAACCACCTGTTTCTATGGCTACTAATGGAACCTTTGTTAAGGTAACTTCATTGGAGAGACTGTAT AAGACATTTGAAAGATGTTAGGCAACCACATAGATTTTGAGACTGTATAACTCATGCTACTTAAATGTATATACCAGGTAGTGGTTACTTTTCCCAAAAT TATCTTCACGCATTTCAAGTTTTCTTATTCAACTCTGAATTCTGTACTCTGTACTCTTGTCCTTTTATATATTTCAAAACTGGTATTGTACAAATCTTAC TAGTCCAATACAATATTAATTCAAAATAAA BLAST
Tissuepods
Gene nameLI_gene_172925; 
Additional informationdetails; 

Expression of Ll_transcript_343895

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_343895

BlastpDNA mismatch repair protein MLH1 from Arabidopsis with 66.11% of identity
BlastxDNA mismatch repair protein MLH1 from Arabidopsis with 60.87% of identity
EggnogThis protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity)(COG0323)
KeggLink to kegg annotations (AT4G09140)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441032.1)
PfamDNA mismatch repair protein Mlh1 C-terminus (PF16413.4)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;