| Id Trinity | TRINITY_DN49877_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_341534 |
| Sequence | GAAAGTTAACATTGAGATCCGGTTCGGGTTATATCAAATGCAGTTTTATGCTGCTAAGTCATAAACAAAGCCAAAGAAAAGTGAAGAACAAGCTTATTTT TTTCATTCTGAGATTTCTTTTCTTTTCTTTTCTTTTCTCGCTTTTAGGGTTTTGGAATCGACGCAATGTCTAATCATCACCGTTCTTCGAGCGCTTCCTC GAAGAACGGTCTTCCTCCTCAAGAACTCCTTGACGATCTCTGCAGCCGGTTTGTGTTAAATGTGCCGAAGGAAGACCTTCAGTCATTTGAAAGGATCTTG TTTCTCGTGGAGAATGCACATTGGTTTTATGAAGATAATTCTGTAGAAAATAATCCATCTCTGAAGTCATTAAGTCTGAAGGAGTTCACTTCATTATTGT TCAATACTTGTGAAGTTTTGAAGCCTTACGTGGCCCATATTGATGATATATTTAAGGACTTCACTTCGTACAAGGTTCGAGTTCCTGTAACTGGGGCAAT TATTCTTGATGAAACTTATGAAAGGTGCATACTAGTGAAGGGATGGAAAGGTTCAAGCTGGAGCTTTCCTCGTGGCAAAAAGAGCAAAGATGAAGAAGAT CATGCATGTGCCATTAGAGAAGTCATGGAAGAAACTGGTTTTGATGTTTCAAAACTTCTGAACAAAGATGAATACCTTGAAATCATTTTTGGACAACAGA GAGTGAGGCTTTACATTATTGCTGGTGTGAAGGATGATACAGCATTTGCCCCACTTACCAAAAAGGAGATCAGTGAAATTGCATGGCATCGGCTTGATGA ACTTCAACCAGCAAGTGGTGATGTGATATCTCGTGGGATCACTGGCCTCAAGCTTTATATGGTGTCCCCTTTTCTGGCATCATTGAAATCTTGGATTTCG TCGCACCAACCTCCTATGGCTCCAAGGCTTGATTTGCCTCTTAAAGGAATTTGCGTGTGGAAAGCAAGGAACAGTCCTATCGGAAGTAGCTCGATGATAA TCGACAGCCAGCCAACAAAACCTGAACCTGATTCTCACTCTATTGATGTGGGGCCTGGCAGGAGCTTCAGGAATTTCAAATTTGACACTGCTTCAATTTT ACAAGCAATGGAAGCTGCATTTTCTTCTTGAAGGTCCAGCAACCTTCCTGTAGTAGCTGTACAAAATGTCTGCTGGGAGAGTTAGCTCCATATACTTGTG GATGTTCCCAGCTCGGACAAGATTGCCTCCAGTGTGAGGATACCTGTGGGAAACCAAAAAAGGTAGTAGCTGTACAAGCTGTACATGACGTTTCTCAAGT TGTTTTTGGTTGAGTAGTATGTACATTGTGTACATGAAGCATTTGTGGCTAAATAGTATTTGTCAGTTCATGTAGAAAACTAGAAAAATAGTTCAATGTT GAAGTTATCCTCCTCCCTTATTTTGCACTCTTCGTTAACTATGAAAAATCTTTAAAGTGTAGTGTTTCATTTGTCACTGAATTTTATAACACAGTTTCCC ACCCCTGGTGTCCTTTTTTGGTTTGATAATTTTATCTTTGATTTATGCATGGAATCAATTTTATTTACAATGGCACTTGGTATAAAGTACATATATTCAA ACCTTTGAGAGGATCTTGAAATTATGGTGACCTTTTCTTCTAAAACTAATGAAATACTTATGATTGTTAGAGACAAGGATGTGGCATTATTAAAACTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172939; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341534
| Blastp | mRNA-decapping enzyme subunit 2 from Arabidopsis with 63.54% of identity |
|---|---|
| Blastx | mRNA-decapping enzyme subunit 2 from Arabidopsis with 63.54% of identity |
| Eggnog | Nudix hydrolase(COG0494) |
| Kegg | Link to kegg annotations (AT5G13570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449802.1) |
| Pfam | Dcp2, box A domain (PF05026.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |