Ll_transcript_342016

• Id Trinity: TRINITY_DN49896_c3_g2_i3
• Name Transcript: Ll_transcript_342016
• Sequence: AAGACGACCATAGTTTATTCGGGCTTTTTTGTATAAAAAGAAAATACACATTCTCTTCCCTCAAAATCTCACTCATACTAGTGTTATCTTTCATGTAGCA GCTACGACCTAACACAAAGCTTCTTCAATCAAAGGATTCTCATAGGAAAATGAGGGTTTGAAATTGACAACTTTTTCTGGGTGGAAGGAGATATTTGAAT CAGATTTTGGGGTGATTTTTGTTTTAGTGAAGAGGAGATAAGTTTCCAGCTTGTGAAGCTTTTGATTTTGTGTGTTTGGTTGAAAAGTGTTTTGCAATGG AAGAAAGGCTAGGCCAGAACTCGGTTCCTGCATCACATCCTATTGATAAGTATAAGATTCTGGATGTTAAACCGATTCGTAGTATGATACCTGTGTTCTC GATGCCTCCTCAAGGTTCAGCCTCCGGGGAGTATCCTTCCGGGTTTACTCCGTTTTTCCCATTTGGTGGACCTCAGCAAACACCGTCTAGGGGTGTTGCC ACACCAGCTCCATTACGTGCGTATAGGGCTAGGGACACTGATGGTTTCAACGATCATGGAGCGTCATATTCCCGTGACTCGCAATCATCGAAAAGGAAGC ATGGTAAGAGAACTCCGGTGGTGCTTACGGATTCGGGTTTTTTAGTTGGTATTACCCCAGATCTAAGAGAAGACGGGAATCGTGATGTGGTTAATCTTAT ACTCATGACATTTGATGCATTTCGAAGAAGGCTCTGCCAACTTGAAGATGCCAAGGAATTGATCGCGGGTTCAATCAAGCGTGCAGATTTAAAAGCTTGC AATACTTTGATGATGAAAGGGATTCGTACAAATATGAGGAAGAGAGTAGGAGTGGTGCCCGGGGTTGAGATTGGAGACATTTTCTTCTTCCGAATGGAAT TATGTATTGTCGGTTTGCATTCTCAATCCATGGGTGGAATTGATGCCATGCATGTCAGAGGTGAATCTGAGGAGGAGACTCTGGCCGTAAGCATAGTTTC ATCAGGAGAGTACGATGATGAGGCAGAGGATGATGATGTTATAATTTACACTGGCCAGGGTGGGAACTTCAACAAGAAAGGTAAGCATGTGAAGGATCAG AAGCTTCAAAGGGGTAATCTTGCTTTGGACAGAAGTTCACGGCAACACAATGAAATAAGAGTCATCAGAGGTATAAGAGAGGGCGTGAATCAAAATTCAA AAATCTATGTCTATGATGGTTTGTATAAAATCCAAGATTCGTGGATGGATAGAGCAAAAAGTGGCGGCGGTGGCGTATTTAAGTATAAGTTGGTGAAAGT GCCTGGTCAGGCAAGTGCCATTGCTATTTGGAAATCAGTTCAGAAGTGGAAGTCAGGCTTCCCTTCAAGGACTGGACTTATTCTTGCCGACCTCTCATCA GGAGCTGAGAGTATTCCCGTAACACTTGTCAATGATGTTGATAATGAGAAAGCGCCTGCTTTTTTCACTTATTTTCATTCTCTTAGACATCCGAAATCAT TCAGTTTAATGCAACCTTCACACGGCTGCAACTGTACTAAAGCATGTATCCCTGGTGATGTGAACTGCGCTTGCATTGTAAAAAATGGAGGTGATTTTCC GTATACTGGCAATGGCATTCTGGTGGGTCGGAAGCAATTGGTTTATGAATGTGGGCCCACTTGTCAATGTTTTCCTAACTGCAAAAATCGAGCATCCCAG ACTGGTTTGAAGCACCACTTGGAAGTCTTCAAAACAAAGGATAGAGGTTGGGGTCTTCGATCACTCGATCCTATTCGTTCTGGCTCTTTTATTTGTGAGT ATGCCGGAGAAGTTATTGACAAAGCCAAGTTAAGCCAGCTGGTGATGGAAAGAGATGATGACTATGTTTTTGATACAACCCATATTTTTGATACATTCAA GTGGAATTACGAGCCTAGGTTACTAGAAGAAGAGAGTACAAATGATGCTAGTGAGGATTACGCTTTACCGTATCCTCTAATTATAAGTGCCAAGATTGTC GGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAACCTGTCTTATATGAAGAAAACAATCAATCCTTCCTACATGTTGCAT TTTTTGCACTCAGGCACATTCCCCCAATGACAGAGTTAACATATGATTATGGATTTTCTCGTGATGAGGGTAGCAATGCACCCAAAGGTCGAAAGAAATG CTTATGTGGATCATCGAAATGTCGTGGTTCTTATGGTTGACATTTTCATACAATTGCTCACACACGAGCTGGCATATGTCCTTGCGGCTAAAGAGAAACA CAGGTCACAGGTGGATGATAGCATTCAAGTTCAAGAGTTAGATGAAGTTTAGAAGTTCCAGCTTTGTGGATGCATGCTTCAAAATATCATTGTCAATGGC CAAGATACACTAGACAGCTTTTAACTACTCATATTCATCCACATGTTTATGTCTACTTTGTTCTGTTGACTTGGATTTGGTTTAGAACTGTTTCTTCAAA TTTGGGATTTAGAGTTAATAGTATGAATCATATCCTATGCTAATTACATTTTCCAGGGTCATTTGATTGCAGCTGCACCTGTCATGGCTCATGATGGAGT GAACTATGTTCCACTCCTGTTATTTATTAGTAAGATTAGTACCGGTAGAAATACCCGCAACGAATACCCGTAGAAATATCCATTCCAATGTATGGATTCT TGTGTTTTGTGCATTGATTACTGCTAAAAAAGGATGGCGTAAAAACCTGACCTCGGTACCCGTAGAAATACCTGCAATGAATATGTATAAAAATAGC
• Tissue: pods
• Gene name: LI_gene_173092;
• Additional information: details;

Expression of Ll_transcript_342016

FPKM

• PAB: 4.8
• PNAB: 17.3
• PS1: 22.9
• PS2: 12.4
• PS3: 18.2
• PW1: 13.2
• PW2: 12.2
• PW3: 9.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342016

• Blastp: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 from Arabidopsis with 51.38% of identity
• Blastx: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 from Arabidopsis with 57.66% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT1G73100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419503.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;