| Id Trinity | TRINITY_DN49921_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_456414 |
| Sequence | GGTGGATATAAGGGTGGGTGAGTGGAGCAGTAGGAGACATATGAATAAGCAAAAGCTAGAGGAGCTAATTCTGATTTTGGGCTACATAACAGCTCTCAAG AAGTTGTGCAATCATCCAAAGCTTATATATGATACCATCCGAAGTGGGAACCCAGGAACTTCAGGTTTTGAGGACTGCATTCGATTTTTCCCTCCTGAAA TGTTATCTGGAAGGTGGATAGTTTGGATTATATTTCACTTATACATTAAGTCTCTACATTAGTGATGCTACAGGAGTTTTCTGGACAGGTCTGGCTCATG GACTGGAGGGAATGGAGCTTGGGTTGAACTATCTGGGAAAATGCATGTCTTAGGAAGATTACTTGCTCATTTACGTCAGAGGACAAATGACCGCATTGTC CTTGTCTCAAACTACACTCAGACTCTCGATCTTTTTGCTCAATTGTGTCGGGAACGAAGGTACCCTCATTTGAGACTTGATGGCACTACATCAATCAGTA AAAGGCAGAAGTTGGTCAACTGCTTTAATGACCCATATAAGGATGAATTTGTTTTTCTGCTAAGCAGCAAGGCCGGTGGTTGTGGACTCAATTTGATTGG TGGAAATCGACTTGTCTTGTTTGACCCCGATTGGAATCCAGCAAATGATAAACAAGCTGCAGCAAGAGTGTGGAGGGATGGGCAGAAAAAAAGAGTTTAT GTTTATAGATTTTTGACTGCCGGAACAATTGAAGAAAAGGTCTATCAGCGTCAGATGTCAAAAGAAGGGCTGCAAAAGGTCATTCAACAGGAGCAAACAG ATAGCAGTGTGGCACAGGTCAAAATTACTTCTAGCTTTCTACCATGTTTTGTAGTTAGTGCTGCTTATGCAATGCTATTCATAACATTTATTAGTTTCAG GGTAACTTACTTTCGAAAGAGGATCTTCGTGATTTATTCACTTTTCATGAGAGTGTCAAGTCAGAGATCCATGAAAAGATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_173295; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456414
| Blastp | Protein CHROMATIN REMODELING 25 from Arabidopsis with 85.45% of identity |
|---|---|
| Blastx | Protein CHROMATIN REMODELING 25 from Arabidopsis with 76.38% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT3G19210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444509.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |