Ll_transcript_458220

• Id Trinity: TRINITY_DN49966_c0_g3_i3
• Name Transcript: Ll_transcript_458220
• Sequence: AAGTAGTGAGAGTATCACTTCGAAATTAGTTTAATCTCTTGTTTCTTAACACACTCACACAGTGTCTGTGAACTTTTTCTCAATGAAGAAGATGATGGGC TTAACCGCCATTTTACTCCGTTCAACCACCACCACCGCCGTCTTCTTTTATCTCCTCATCTCCTCCGTCCACTCCTTCTACCTTCCCGGCGTTGCTCCTC GCGATTTCCTAACCGGTGACCCGCTCTCTGTCAAAGTGAACAAATTATCATCTACCAAGACTCAACTTCCATATGATTACTACTACTTGAAGTACTGCAA ACCTTCCAAGATTGTGAATAATGCAGAAAATTTGGGAGAGGTTCTTCGAGGTGATCGAATTGAGAATTCGATATATGCGTTTCAAATGAGGAAGGAACAG TCTTGCACTGTTGTCTGTCATGTTACTCTGGATGCTGAATCTGCCAAGAATTTTAAAGAGAAAATTGATGATGAATATAGGGTAAACATGATTTTGGATA ACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGATGGAAGTCAATCAACAACATATGAACATGGTTTTCGTGTTGGCTTCAAAGGAAACTATCAAGGGAG CAAGGAGGAGAAATATTTTATCAATAACCACTTGAGTTTTAGAGTCATGTATCACAAGGATTCTGAAACGGATTCTGCTCGTATTGTTGGATTTGAGGTC ACACCAAACAGTATCAATCATGAATACAAGGAGTGGGATGACAAGAATCCACAGGTAACAACATGCAACAAAGACACTAAGAATTTGATGCAAGGTAGTA CTGTCCCACAAGAAGTTGACACCAACAAGGATATTGTATTTACATATGATGTTTCCTTTAAGGAAAGTGAGATCAAGTGGGCATCACGGTGGGATACATA CCTTCTAATGAATGATGATCAGATTCACTGGTTTTCTATCATTAACTCTCTGATGATTGTTCTTTTCCTTTCTGGAATGGTGGCAATGATCATGATGAGA ACTCTTTATAGAGACATTGCTAATTATAACCAGCTAGAAACCCAAGATGAGGCTCAAGAAGAAACTGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGC CACCCATCAATTCGAATTTGCTTTGTGTCTATGTCGGCACTGGTGTTCAGCTCTTTGCAATGGCCCTTGTGACAATGATATTTGCTTTGCTAGGGTTTTT GTCACCATCCAATCGAGGGGGTCTCATGACTGCCATGGTTCTGTTGTGGGTTTTTATGGGTTTATTTGCTGGCTATTCATCAGCACGTTTGTACAAGATG TTCAAGGGCACAGAGTGGAAGAGGAATACCTTGAAAACTGCATTTATGTTTCCAGGCATTCTCTTTGCAGTCTTCTTTGTGTTAAATGCCTTAATCTGGG GGGAACAATCGTCAGGGGCTGTTCCTTTTGGAACAATGTTTGCTTTAGTCTGCCTTTGGTTTGGTATATCAGTACCCTTAGTCTTTGTGGGTAGCTACTT GGGTTTCAAAAAACCAGCAATTGAAGACCCTGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAACAGGCATGGTATATGAAACCCCTCTTCTCCATT CTTGTTGGAGGCATTCTGCCATTTGGTGCTGTGTTCATTGAGCTCTTCTTTATCTTGACATCAATATGGCTAAACCAGTTTTACTACATCTTTGGCTTCC TCTTCATAGTGTTTGTTATCCTATTAATCACGTGTGCTGAGATTACGATTGTACTTTGCTACTTCCAATTATGCAGTGAAGACTACAATTGGTGGTGGAG ATCTTACCTCACTGCTGGGTCCTCAGCTCTGTACCTTTTCTTTTACTCGATTTTCTACTTCTTTACCAAATTGGATATTACAAAGCTGGTCTCAGGCATG CTTTACTTTGGATATATGATAATTGTTTCATATGCCTTCTTCGTGTTGACCGGAACTATTGGCTTCTATGCTTGCTTCTGGTTTGTCCGCAAGATCTACT CTTCGGTGAAGATTGACTGATTATGAGAGCATCATGTAGTGGCGGAGTACAAGATGAACACTTAACCTGAAAAGCTGTAGTTATGTGAGCAAAAATACTG CAGGGAAGTTTTATTCCCTCTCCCTCGAAAATGACTCTTTTGTTGATTGTTAGAGTAGCAGTTGTACTGTTAATTTGTTACTGTTTTTAAATATTATTGT AGTAGTTTCTGAAACAAATGCTGAGTTATCTGCATATTTTGACATGTTCATGTCACAACATAGTGATAAGGTATTCTATCAGTAATTAGTATATGAGATC TTACTGTTTAATTCAAAAAATAAGCATGCTGTTATTACCTGTAGGAACTGTTCTTAGTTGACTCAACTCTTGTCGAACTCTGTCAGATTTGTGTCGGCCT ATTACCACTGTAGTTGATTCAATCCTCCATCACCCAACCTAATGAGTGTCGGCTGTATGGATTTGATGACGACCATCGAAATGTTTTTCGTAAAATATTT GACAAGAATTGGAGTAAAATTACTTGTCTATAACAATGAACTCCATTGCTGGCTATAAACTAAGCCCCTGTTATCTTGCAGTTAATGTACTGTTTACTAA CTCTGATTTTGAATCCTTGGCTCAGTTGTGTGATTGTCCTCGATGATGTGAGTAACATCTAGCAGTGGATGTGGTTAAAATTAGAAATAGTTATGTCTCA TAGTGTAGCTTAAATGGTTGTGGCATATTATCTGAATACTTGAGATTGAGAGTTCAAACCCTTTTGAATACACTGCTCCTGTTATAAGACCCATGAGTCC TTTCGACAAAAAGAGTGGATGGGGATCCTCTCGGGTACCGGAGAGTCTAACACTAGATATGATTGTAGTACATGGC
• Tissue: pods
• Gene name: LI_gene_173606;
• Additional information: details;

Expression of Ll_transcript_458220

FPKM

• PAB: 1.4
• PNAB: 27.6
• PS1: 32.3
• PS2: 21.9
• PS3: 29.7
• PW1: 17.6
• PW2: 14.2
• PW3: 8.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458220

• Blastp: Transmembrane 9 superfamily member 7 from Arabidopsis with 89.12% of identity
• Blastx: Transmembrane 9 superfamily member 7 from Arabidopsis with 89.12% of identity
• Eggnog: transmembrane 9 superfamily(ENOG410XPIW)
• Kegg: Link to kegg annotations (AT3G13772)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424649.1)
• Pfam: Endomembrane protein 70 (PF02990.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;