| Id Trinity | TRINITY_DN50008_c5_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_532337 |
| Sequence | GTTAAAATAAACTAAAACTTCCCAACAGCTATTTGTTGAATGAAGCATTGCGTTTGAATTCAAGCAGAATTAATTTTCTATCTAAGGATTTTAGTTAACA ATAAGTTGGGAAACCTAGACATTAAACAATACCAAAATTAACAATAAGTTGGGAAACCTAGACATTAAACAATACCAACATTAACAATAATTGACAACAG CAAGAAACGCAGCCATTTGAGTTTCACGACAATGGCACTTTCACGCCTTCGTTACCCTCTCAACTTTTCTCGTTCCCTTCGCCTCCTCTCTTCCACATGC TCCACCAGATCCATTTCCAGAACTTCTATTTCTGGGATTATTTCTGTCGGTGGTGATGGCAATCTAAGGCCTGCATCTTTGTCTCGGCTCACTGGAATTT TTGGTAGTTCTTTGAAATCAAAGTGGATTGATGTCAGATACTTCTCTTCTTCAGACTTTTCACATGAGGTCCTGGGGATGCCAGCTTTATCTCCTACGAT GACCCAAGGTAACATTGCGAAATGGAGGAAGAAAGAAGGAGATAAGATAGAAGTGGGTGATGTACTGTGTGAAATTGAAACCGACAAAGCTACTCTTGAA TTTGAAAGTCTTGAAGAGGGATTTCTGGCTAAGATATTGGTACCTGAAGGTTCAAAAGACGTGCCTGTTGGTCAACCAATTGCAATAACAGTTGAGGATC AAAATGATATTCAAAATGTCCCTGCTTCTGTGGGGGGAGAGGCCGGGGTTGAAGAAAAGAAACCAACTGGCCCGGATACGACAGATGAGGAGACAAAACC AGATTCAACTTCTACTAAGATTAATGCATCTGAACTTCCACCTCATATCCTTCTTGAAATGCCAGCTTTGTCCCCAACAATGAACCAAGGTAACATTGTT AAATGGAGGAAGCAAGAAGGAGACAAGATTGAAGTGGGTGACATATTATGTGAGATAGAGACTGACAAAGCTACCCTTGAATTTGAAACTCTTGAAGAGG GGTACCTGGCGAAGATACTTGTACCAGAAGGTTCAAAAGAAGTGGCTGTCGGACATGCTATTGCGATAACAGTTGAAGATGCAAATGATATTGATGCTGT AAAGGACTCTGTAAGCAGCAGTTCAACAACCCAACCAGAGAAGGTTACCCAAAGTGAGACTAAAAGTGAGGTCAAAGCACACAAAAGCAATGCAACAAGG ATCAGTCCAGCTGCTAAGTTGCTAATTGCAGAATATGGATTGGATGCTTCGACGTTGAACGCATCTGGTCCTCTTGGAACCCTACTGAAAGGGGATGTTC TTTCGGCAATTAAGTCTGGAAAGTTGTCTCCAAAACCCACCTCTTCTAAAGAAAAGGCATCTCATCAACAAGTTGCGTCATCACAAGATTCAAAGTCTGA CTTAAAGCAATCAAATGTTTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGGTTATTGGAATCCAAACAAAATACACCACACTTA TACTTATCATCAGATGTTATACTAGACCCTCTTCTTTCCCTTCGTAAAGATCTTAAAGAGCAGTATGACATTAAAGTTTCAGTGAATGACATTATTATCA AAGTTGTAGCATCTGCTCTCAGAAATGTTCCCGAAGCAAATGCATACTGGAATGATGAGAAGGGTGAGGTCATTTTAAGTGATTCTGTTGACATATCAAT AGCAGTTGCCACTGAAAAGGGATTGATGACTCCAATAATAAGAAATGCTGATCACAAGACCATATCTGCTATCTCCTCAGAGGTCAAGGAATTAGCTGCA AAGGCACGTGCAGGCAAGTTGGCGCCACATGAGTTCCAAGGTGGAACTTTTAGCATTTCAAACTTAGGAATGTTTCCTGTGGACAAATTTTGTGCTATTA TAAACCCCCCACAGGTTCTATTCTCTCTCTTTCTCTCTCATGCACGCACACACAGGTGCATGCATACTTGCTCTTACCGCATCTAATTTGCTAGCCTTGT GTAAGAATAAAACTGCTTGCAATATAAATTTTATTAAGTATACGGTTGAAGTAGCTGAGTAGATTGTGAATCTAATTCTTACCAATTCCAATCAGTAGTC ACTCACCCATAAATAGATACATAACTTTTCTTAATAAATGAGTTTCTAGAAAATTATTTTACATATTTTTGAATTTTATTACCGTTCTTTTACTTTCTCC CAATATTTTATTCATTTTGTGAAGATGAATAACCAAATTCTATGTTTTCTAATCTATCATCTAAAGCATCGAAGAGCCAAACTATCATTGCGAACCAATG CTGATGGTTACATAATATGATTTTGATTATAAGAACAAAACCATCATTGAACCAAGGACTAGTAATTCCAAATGTGATTGTTTAGAGGAGGGAAAGGGGG TAAAAAAGAAGGGAAAACCCGAAAAAGTTCAATGGGAATGGTTGCATAAAGATGCTCTAAGTATTTTGCTCCTTTTGATCTCCGGTTCTTTTATGGCAAA TACTAACAAATGAAGGAGCCAAATGTAGTGAAAACTTATTGGAAAACATACCTTTTTATATTCTCGGGGAAGAAATAATGTGCACTTATGATATTTTTTC CATTTCTAGTAACAGTAACAAGTTAAGGGCACTTGTTAGCAAAACCCTTATTGGCTTCTGTTATTATATGCTGCAGGCTTGCATTCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173929; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_532337
| Blastp | Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial from Arabidopsis with 64.44% of identity |
|---|---|
| Blastx | Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial from Arabidopsis with 63.89% of identity |
| Eggnog | Dehydrogenase(COG0508) |
| Kegg | Link to kegg annotations (AT3G52200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461757.1) |
| Pfam | Biotin-requiring enzyme (PF00364.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |