Ll_transcript_531785

• Id Trinity: TRINITY_DN50011_c0_g2_i7
• Name Transcript: Ll_transcript_531785
• Sequence: AAAAAAGTGATTTCCTTTGGAATAAAAAATAATTCGAGTAGCGTTTAAGTGATTTAACTCTTTCTTAGTTAATCTTTCAAATCCCTAATTCACTTGAAAT TCAAATTAACAACACCAAATTCAATTCATTTCATTTCACACTCTTCCATCATTCCAATGGAGGATTCCGATGGAGTCCTCAACTTCGATTTCGAAGGCGG TCTCGACGCTGCTCCTCCCTCCGCCGCCGCCGCCACCGTCCCCTCCGCTGCCGCCTCATCCGGACCTCTCATCCACCACGATGCCTCTGCTGCCGCTTCC TCCATGGCCAACGGCAGCGCCGTCGGTATAACCCCTCATTCCGCTGCTGATCACCCCTCTGGCAACATACAAGGGCGGCGGAGCTTCCGGCAGACGGTGT GCCGGCACTGGCTTCGAAGCCTGTGTATGAAAGGAGACGCGTGCGGGTTCCTTCACCAGTATGATAAGGCGAGGATGCCGGTGTGCCGGTTTTTTCGGCT TTACGGAGAGTGCCGGGAGCAGGATTGTGTTTATAAACACACCAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCCAATGGGCCT GATTGCCGATATAGACATGCAAAATCTGCTGGACCTCCACCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAACATTTGTATTCTTACAATTATAATGGTT CTAACAAATTTTTCCAACAAAGGGGTGCTAGCTATAACCAACAAGTTGAACGATCTCAGTTTCCTCAAGGAGTTAATTCTACAAATCAAGGTGTGACTGC AAAACCCTTAGCAGCAGAGTCAGGTAATGCCCAGCAGCCGCAGCAAGTTCAACAATCGCAGCAGCAGGTCAGTCAGAGCCAAATACAAAGTCCCGCTAAT GGTCAGCCCAATCAAGCCAATAGAACAGCAATCCCTTTACCACAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATCTTGAGTTAT CTGTGCAACAAGGAGTATGGGCAACACAAAGGAGCAATGAATCCAAGCTAAATGAAGCCTTTGACTCTGTGGAAAATGTGATATTGATTTTTTCAGTCAA TCGAACACGTCATTTCCAGGGGTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCAGGAGGAAATTGGAAATATGCTCATGGAACTGCACATTAT GGGCGGAATTTTTCTGTTAAATGGTTAAAGTTGTGTGAACTGTCATTCCACAAAACTCGCCACTTACGGAATCCATACAATGAGAACCTACCAGTGAAGA TAAGTAGAGATTGTCAAGAGTTGGATCCCTCAATTGGTGAGCAATTAGCATCCTTGCTTTATATTGAGCCAGATAGTGAACTCATGGCTATCTCAATTGC AGCAGAGACTAAACGAGAAGAAGAAAAGGCAAAGGGAGTGAATCCCGATAACGCAGGAGAAAATCCAGATATTGTCCCATTTGAGGACAATGAAGAAGAG GAAGAGGAAGAAAGTGATGAAGAGGAGGAAAGCTTCATTCAGGGTGCTGGGCCACCTAATCAAGGCAGAGGAAGGGGCAGAGGCATGATGTGGCCGCCTC ACATGCCTCTTGGGCGTGGAGCAAGACCTATGCCTGGAATGCCGGGATTTAACCCAGGAATGATGGGTGATGGATTACCCTATGGGCCTGATGGATTTGG TATGCCAGATCTTTTTGGCATGGGGCCCCGCGCTTTTGCCCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGCCCCCCAGCAGCGATGATGTTTCGT GGGCGACCCTCACAACCTGGGATGTTTCCTGGTGGTGGGTTCGGGATGATGATGAATCCAGGACGCCCTCCCTTTATGGGAGGGATGGGGGTGGGTGGTG GAAATCCGTCAAGAGGTGGTAGGCCAGTCAACATGCCTCCAATGTTTCCCCCACCTCCGCCCCCACCTCAGAATGCCAACCGAGTCCCCAAGAGAGATCA AAGAACCAACGATCGTATCGATAGGCAGGGCTCAGGATCAGAGCAGGGCAGGAGCCAAGACATGCAGAGTCAAAATGGCGGACCGGATGATGACATGCAA TACCAGCAAGGATACAAGGCAAATCAGAATGATCAGAATGAAGATAGTGAAAGCGAGGATGAAGCACCGAGGCGGTCACGACATGGAGAGGGGAAAAAGA AAAGGGACACATAGAAGAATGGCAATACAAACTCTAAATGCCCTTCACCAAGCACAGCATATTGATGATCCACTAACCAGGATTCTAGTTTCCAATGAAT TTATTTTCAATGAATTGATGAGACCAGATCTCTTTGTATGAGTTGTTTTTTGCCTAAGAGACCTGGGGTGCTTCACAATAAGTTTATTAATTTATTTCAC ATGTCATGTCATTTTTACATATGGTTCATTGGACGGTTTAATGTTAAATTTAACACAATCTGAGGCCAAATTTAGTAGACTCAGAAGAATGTATACCTAT TTATTTAAAAGTTTATATTTTTAATACATAGATGGTGAATTAAACACAAGTAATAATTGCATTATTGCATAACCCCTGTCTCTGCATCCTATACGGACAC ATGTT
• Tissue: pods
• Gene name: LI_gene_173959;
• Additional information: details;

Expression of Ll_transcript_531785

FPKM

• PAB: 7.5
• PNAB: 5.9
• PS1: 6.7
• PS2: 5.3
• PS3: 5.7
• PW1: 6
• PW2: 7.2
• PW3: 3.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531785

• Blastp: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 63.82% of identity
• Blastx: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 69.44% of identity
• Eggnog: zinc finger(COG5084)
• Kegg: Link to kegg annotations (AT1G30460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419266.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;