Id Trinity | TRINITY_DN50064_c1_g1_i3 |
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Name Transcript | Ll_transcript_531627 |
Sequence | CTCCACTCATCTCTCTTACGCCAACAATAACTACTATTAATAATGTTATAACATTGTAATATAAACAACTCGCGGGGATAGCTCAGTTGGGAGAGCGTCA GACTGAAGATCTGAAGGTCACGTGTTCGATCCACGTTCACCGCATTCTATTTGATTTAGTTTTTTGATTTAGTTTGTGTGGATTGAAGAAAGTTTCGTTT TTCTGCTTTGAAATTTTTTTCTGTGCAATGGGGATGTTGTTAAATATCCCATCAATTATTTAAGATATTGTGTTTTCATGCAACTGGGTTTCCAGAAATC TTTTAGGTTTTCAGATTTCAGAGAGTTCAAGTGTTTGGTAATCTAATCATAGCTACTTGTAGAGCAAAAGTCCATGTGGTTAAAACACTATTACCCCTTT TCTCTCTGTAGTTTTACTTTTTACCTCTTTTTCGTGTTTATTATCACAAATATTGTATACTTGAACGTTGGGATGAGCTTGGGTCAGGTTGAGACGGATA AGGTTTGTCTTTATCTGGTCCTAAATGTAGTTCGGGTCATCTTTAGAATTTGGATCTGGCTCTAGACTCAACCCTAACTATCGATCAGGTTAGCCTTTAA ATCTGTAGCTTACACATATGATGAGTGAATAATCATGGGACGAGTCGGGTCGGGTCATGCTTGTTTCCTACCCGACCCTAGACATTGAACATGTCTAATT TTTGAACCCGAATACGGCCTTAGACTCGATGAGAGCCGATCTTATTTGATCCCGGTCGTGTCGGGTGAGCGAGTAGGGTCATCATGTTCACCCTTACTTG AAAGTAACACTATACTTGTAGATATGGATACTGAAAACTTTTTCTTGTAACACTTCTGCTACAAGTAGAAATAGAACTCTATCTGCCTCAAGTTCACAAT TTAATGCACTTCCTTAAAATTCACATAGATTCTGTATGAGAAGTTGATTGAAAGTGGAATTCATATTTTTTACTTATTAGTTTATCCTCTTTTGAAAGTT AGTATTGATTTTACTTGTTACCACAATAAGTAAAAATGGGTTGCATAATCGAAATCGAATGAGACATAGATATTCTATGCCTTCCTCACTCTCAAACATG TTTTCTACTGATACACATTCCTAGTCTTTTAGGAATATTTTGTAATTTATGGTCAATAGTCAACATCTTATTCAACAAGTTAAGCCATTTGCTTAGAAGT TAGGATGAAGTTTCTGCTAAAATATATAATTCAATGACATTCCTAATCATTACATGTCTGTCTGGATGTTCTGTTCTGCCTGTAATCACTAAGTATTGAC AAAGTCAATCTGCAGCACATAGGTTCAGGCATGAATGCCTATTCAAAAGACTAATTTTATTTGCTAGTGAAAAGCAAATGACCGGAAAAATCGTTATATT TTTCAAGCCAGTATGAAAACATGAATATTCCTTTTCTCCTTTAAAATCTATGTATATTCTAATGGCCGTGGATCTTGTTTTTGTGTAAATCATGGAACTA TACTCATAGAGTTGCGTTCAAGATGGGCCAAGTTGGTTCAAGGTTTACAAAATATTTGAAGAAAATGAGAAAGAGACAATTGAAAAGAGGACAAGCCAAC AATAATATAGAAATGACAATGAGAGAATTGACAACAATTTTTTTATCATGCACACTTTTTAAAATATTTTTGTGAAGACTTCTTAATTAGTGATCCATAG AAAAAAGTAATGGAGTAAGTAAGATGACACTAAATAAGAGTTTAATATTGTGTAACTTTATATAGTTGCTAGTTTTCTACATATAAAAGGTTCAAAGCAC AATCATGCAAATTGTAAATCATATACTGCTTTTTTTCTTGTATATTCATCAAGAGCATTATCACCTCTCAGGCTCCTTTTAAGATGACCAATGAATACTA CGATTTCGGACCTTACAAGATACACCATTCTTCAGTGTTCTATATAACTGATCTTTCTTTTGCCTTTGTCAATCTGCGCCCTGCTATGCCAGGTCATGTG CTCGTTTGTCCAAAGCGCGAAGCGAAGCGTGTTGCAGATCTCACTGCTGATGAGATTACTGAACTGTGGATCATAGCACAGAAAGTGGGAAAGCAGCTTG AGAGCTACCATAAGGCATCATCACTTAGATTTGGTATTCAAGATGGACCACAGGCAGGGCAGACAGTACCTCATGTTCACATTCATATCATTCCTTGGCC AAATGCCGATTATGCGAAAAATGATGACAAATATGATGAAATTAATGAAAATGAGGAGTTGAAACAAAAGCTTGCTTTGGATAAAGAGAGGAAGGATAGG AGCCTTGAGGAAATGGCTAAAGAGGCTGATGAATATAGAAAATTTGTCTTTTGAGAAAAAGGATAAGTTATCATAAGAAATTTTCAATAAGAGTGTAGAT AATAACAAAGGGAGAAAAGTTGGTGATTGTGTGTGCCATAATTTCATGTATTTTCTGGCAGCCAAGGAAAGGCTTTGGAGTTGTACACTAGTACTAAATC TCAATGCAATTTGTTTTATAATTTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_174418; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_531627
Blastp | Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT from Arabidopsis with 62.34% of identity |
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Blastx | Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT from Arabidopsis with 60.25% of identity |
Eggnog | histidine triad (hIT) protein(COG0537) |
Kegg | Link to kegg annotations (AT5G58240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420000.1) |
Pfam | Scavenger mRNA decapping enzyme C-term binding (PF11969.7) |
Rfam | tRNA (RF00005) |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |