Ll_transcript_280691

• Id Trinity: TRINITY_DN50127_c0_g1_i15
• Name Transcript: Ll_transcript_280691
• Sequence: GGTGCGTAAAAGCGTGTGGTCAACTTGGTCGTGGTCTCTAGGGTTTAAAGCATGTTCCGTTGTTGCGAAAGTAGAATTTGAAAGAAAACGCCAGCGTCTT AAAGATCTTCTTTCAATCGTGGTAAAGGTACAAATCATTCTTCACCTTATTCCTATCACTCCTTTCATTCACTGATTTTCTTCACTTTCATCTTTATTTC GTTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAGGGCACAATTCAAGATGCGTAGGAACAGTCCTGGATACTACAGTCCTCCAA GAAGAGGTTACGGCGGTAGAGGCAGATCACCACCGCCGCCGCCGCCTCCTTCTAGGAGAGGACACGGTGGTGGAGGAGGAGGTAGGCGCAGAGAAAGCAA TAATGGAAGCCTTTTGGTGAGGAACATTCCCCTCGATTGTCGATCTGAGGAGCTTCGAGTCCCGTTCGAGCGATTCGGTCCGGTTCGTGATGTCTACATT CCAAAGGACTATTACTCAGGGTAATCACCTAGCTTCAATTTGTTTATAATTGAATGCGGTAGCTTCAATTTGTTTGATACACGTAGCTTTTTTTGTTGTT GAGTTGATGGTATTTTCAGATTGGTCTTGGTGAGAGTAATTTAGTTTTGACTAGTTCATTACTTGACTGTGCCAAAGAATTGAGTGGGGGATGCTCTGTT CCGATTTGGTTTCGTTTTTTTAAAAGGTGTTTTGTATTAATTTTGCAATTTTGAATTCATTTTGGACTGGTTTGTCAGGGGGTATGTTGGTTTGAAATTG AAGTTATAAACCAAGTCCAAGCCCCAAGTTTTGAAGAGGATATCTACTCACTCTTTAACATATTGCTCTCAATTCAAGTGTTGTTAATCTTCATACCAAG ATAAACTATATAATTACACAATCAATACACAAGTTTCATGGAATGGAAGGTTGATTCTTATCCAACTGAAGACTTAGTTTGTTTGGAGCTTTGAATTCAA GTGCTTCTTATAAATACACAAGAATCAATATTGAAGTCTTGAAGGTTTTTCAAGTCATTTCCTTTACTACATGAATTTAAAGATAAAGGACAGCCATTAA GCTTTGGACTTAGCAGATTTAGTAATATTTTAGCATCCACTGCTTTGTTCATGTCACAAGAGAGCCATAGTAAGTTGTCTAAAGAAAGCTATAGTAAGTT ATGTGATTTGAGGTGCTTATTTCCGGGTATGCAAATTCTGCCTAGTCAGCATATTCTACAATCTGTGTCTGCCAATGTTTTTCTAGCATTGTTAGAATGA ATCTCCACTTTTTTCCATACAGACAACCCCGCGGATTTGCATTTGTGCAGTTTGTGGATTCTTATGATGCATCAGAGGCACAGTATCATATGAACAGACA GATTTTTGCTGGAAGGGAAATATCCGTAGTTGTGGCTGCAGAGACAAGAAAGAGACCAGAGGAGATGCGTCATAGGACTAGTAGGTTCAGAGGATCAGGG AGCTATGGGGGGCGAAGGTCTTCGCATTATGGGCGTTCTCGATCTCGCTCAATTTCCAGATCTCGCTCACGCTCACCACCTTATCACTCTGGTTCTAGAA ACCGATATCACTCAAGGTCCTATTCTCCTGCCCCTAGACGGCATAGTGACTACTCTGTTTCCCCTAGAAGGCCAGTTGAGCATCCAAGATCACCAAGAAG TCCTCCCAGGGAGCGAGATGGTGATCAAAACCGCAGGTCATATTCTCCTGGTGAGCGAGATGGTGATCAAAACCGCAGGTCATATTCTCCACCTTATGGT GACGGTGCTGATCAGAACCCAAACAATGGATATGCAGAGAAAGTCATATACAAGTCTGAGGCTGATCGAGAACAGTGGAAATCAAGTAGAGCATCAAGAT CACCCCCTGGATCTAGATCAAGGACTCCTGATTTGTCACCCAGACATGGAAGATAAGGTTGTTCGGCAACATGCTGCTTGGTTTTGTACAACTTCTTAAA TTATTTTCAGGATATTTAAGGACACCAAATTATGCTTAAAGTTTGTGTATTTGATGGATTAGTGTGTAATCTCAGATTTGATACTGATTTGCAATTTGAC ATTCTGAACTTATATGGTAAAACTTAATTAACAACTATGATTGATGAAAATTGTTTTGAGCTTGTCGAACATCGTTTACGTGTGCTCAGCTTAATTGCTG CAGTTGCATCACTGTAAATTGTGAACGAAATGGGTAACTTGTTGCTAAAATAAGTTCGTATGCATGAAGAAATTTGGATTTGAGATCTGTTACAGGTAGT TGTTGCTTTGGTTGGATAAACACCTTAATTGAGTGATTATGTTTGCAGAGTTTGTAAACAGTATATAGTTTTGAGTCAGTAGATAGTGTTTCAGTTTTGT GTTGATTACTTGATTATAAGGTCGAATAAGATCTTAACTCATAAGACAAATTAAGCATCTTACTCACGCACCCGTTTCAAATCCTCGTACTACATGATGC AATGTTGTTTAAAAAAAATTATTATCATTGTACATGGTTTTACTCATGATTATAAAAAATGTTTCACTTTTAATTCCATTTGTTGTTTCTAAAACTTTAT GAAAGCATAAAACAAGTTAC
• Tissue: pods
• Gene name: LI_gene_174848;
• Additional information: details;

Expression of Ll_transcript_280691

FPKM

• PAB: 0.6
• PNAB: 0.7
• PS1: 0.4
• PS2: 0
• PS3: 0
• PW1: 0.7
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280691

• Blastp: Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 76.92% of identity
• Blastx: Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 76.92% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT3G55460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456725.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;