| Id Trinity | TRINITY_DN50132_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_279659 |
| Sequence | CTGTTCATGATGTTACCTAGGATCTCTTTATGGATTCCCTTGTGTCACATTCTCAATTAGTTAAAATGACATAAAAAAACGAGTTCTAAGTAAAGCATTT CTTATTTTTTTTCTTGGTTAAAGAGAGAATCTTTGAGTGTTGGGATGGGAGAAATAGAATAATATAAAATAAAAAAAAAGCAAAATGAGTAAATGCAGAA ACACCATTACTGCATAACAATGGAGAAGATTGAAGAAGAGGTAGCAAAAGTTATTGAAGAAGCAAAAGATGTTGAAGATTTAGTATCAGTTCATATCTCA AAAACCATAAACGATGAACAAACACTACGCCAACGTGTTCTTACTCTTCATTCCAAAATCCATTCACTTCGTTCTTCCCTTTACTCTCTTTTACCCAACA ACACCACCTTAGCTGAAAAGTTGGATGAAGATTTGGAAAGAGCGAGATGCATTGTTGTTGATGGTGATGCTGCTACTTTTCTTCCTGCACATGCACAAGG AAATTTTTTGAGGATGTTTATTGGACCTATTAATGTGCGTGCTTCCAGAAAAGATGTTCAACTCAAGGTTAAAGAGGAATACAACAGTTACAGGGATAGA ACTGCCCTGTTGTTCCTCCTTTTCCCGGCATTACTGCTTATTCTACGATCTTCGGTTTGGGATGGATGCTTGCCAGCTTTCCCTGTTCAGATTTACCTGG CGTGGCTGCTATTCCTTTACACCGGTTTGGCATTGCGAGAGAACATATTGAGAGTCAACGGAAGTGATATTCGTCCATGGTACATTCATTCTTTTCTATA TGCAGGCTTTGTGAAGGGAACTTTTGTTTATAATGACCTTCCATGAAAGGAGAATCGACAATGACTAATTAATGGATAAAGAGGTTCTTGGTTCTATGCT TTGTTCTCAAATTAAATGATTGAAAATTAGATAACTCGGTTGTTAACTCATCAACTCTACTAGTTTTGTATCCAGTGAGGGATACTTACGGAGATTATTG TGTCCATAAATGCTGTCCTAGTGACTAAGTAGTTGGGGAGATCAAGAGTGAATATGGTTTTCATGAACTTGGTAGTGGATGTGAAGTTTGGGGTTTCTGC TACTAACTCAACTCAAATCCTACTATCCCTGGGAGTTTATCATTCTACCCCGTTCTCTTCTTTGCTTGGTTTGGATGGAAATGGCGGCAGTCCATTTTCC TTTACGAGACAACTTCGGTTAGGGATTCTTTTTAGTTTTATTTTTCTACTTGTGGTTGTCATTTTTTGAACTGTCCACTTTTTTGGATCCTCAATGACCA AGATACCTGTGGTTTTGGTATCATTATTGAGCATTATCATTTAGTTTCCTTTATTGGGCATTATCAGTTACTTCTAATCATTATCTTATTGTGAATCCTC TTCCTGAAAACCCTGATGCTACAGCTTCATTATTATGGATGAAAGTAACACTAAGTTATGACTTTCATTTGGATTATGATACTTTCCCTGATTAACACTA ATTGTTTGATGCATGTGTTTGGGCATCAGAGGCCCCTTTCTATTGAAGTTTGTATTGTGTCATAAGAGCTCTCATATGAGTAGCCATCAATAGCAAAGTA AGTTGTTTGGATTGTTTGTATGGCATTCGATGTATGCATCTAAGTTAAACTTTATTGCCATTTCCTTTCGCTGTTTTGAGGTTTTGGCTCTGAGGGAGGT TATGGTGTTTTGTAACCATGCCTGTTTGTTTGATGACGGTGTTTGGTTCAATTGAAATTACAGATCCATTATGGTTTATTCTTTCTGATTCTGCACGACA GGTCCTTTCTTCGTCTATTTGTGGTTTTCAGCTCACTAGTTTTAAATGGAATTCCTTTACTTCGCCAACCGATCGGTTCACTCTTTTGAGCTTGTGTTCT TCATTTGCTGTTTCTTTCCTTTTGGATATTTTCCGTCTCTTAATAATTTCTTTTCTCTTCATCGCTTTGTCCGGCATTAGATTGAGAGCATGGAAGGGGA GGACATATATTTAATTTAGTTTGGCATGCTAACATTGTCATCCTTGCATAACGTATTGCGATTTGAGAAGGGCAGAGATTGGTTTATATAGGCTAAATCT TTTGCCAAATAAACTTGCTATATGGTTACAGGTGGATATATCATCATTATTGTGCTATGGTAATGGCTCTTGTGAGTATCACTTGGGAAATTAAAGGACA ACCAGATTGTGAAAACAATCAGATAGGTGTACAACTTTTCCTACAGTGGGCTATGATGCAAGGAGTTGCAATGCTTTTGCAAAATAGATATCAACGCCAA AGACTTTATACTCGTATTGCGTTGGGAAAGGCTAAGAGGATGGATGTGGTATGGGGGGAAACAGCTGGAGTAGATGGCCAAGTATGGTTACTGTGTCCCA TACTTTTCATATTGCAGGGATTTGAGGCATATGTTGGACTGTTGTTGCTCCAAACTGCATTTGTTGGGGTTTTTTATGAGTGGCAGGTAATATTTTGTGG TGTCCTGTTAATCTTGATGGCTGTTGGGAACTTCATAAACACAGTACAGACTCTAATGGTAAAGTCAAGATTTAAGGCAAAGATGATAAAAAATAAGGGC AAGCAGAGACTGAATTAGCACACTTGTGACATCTTCATCATCTTTGATAGGATGAGGATTTTTTGCACTTGTTTCAGTTTTGACCACAATGCAAGTTAGT GATCAATTTGGCTTTGTTTGTAGCATTAATCATTTAATATGCCTAAGCATAAATTTGGATCAAAAATAATAATTCATGTCTTGCAATTTCTGTTATCCAC TCTAGCTAGTCTATTTTTTGTTTAACCAAATTGTACCTTATATAGTATACCACCTTGTATCTGCTTTATAGAAAACAATATTAAAGAATTCAACTTGCAA GCAACTGTTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174877; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279659
| Blastp | Transmembrane protein 120 homolog from Dictyostelium with 29.17% of identity |
|---|---|
| Blastx | Transmembrane protein 120 homolog from Dictyostelium with 41.41% of identity |
| Eggnog | Transmembrane protein 120B(ENOG410XT6G) |
| Kegg | Link to kegg annotations (DDB_G0288699) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427661.1) |
| Pfam | TMPIT-like protein (PF07851.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |