Ll_transcript_279213

• Id Trinity: TRINITY_DN50150_c0_g2_i4
• Name Transcript: Ll_transcript_279213
• Sequence: TTGGCAAGTGGTCAAAATCTTACCACAGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGTCCTAGGG CTTTTCATGCAGCCTGCTTGGGTTTTGATTGTGCTCCAGAAAGTAGTTGGCATTGTCTAAACTGTAGAGATAATGTTGGTAATGGAAGAGAATCTTCTAT GGCGAGGCCAATCATGATACGGTTGACACAAGTCGATAAAGCTCCAGAGTTTGAAATGGGGGGATGTATTGTTTGCAGGCAACATGATTTCAGCGTTGCT AAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGGGACATAGGACTATGTGAATTGGAAGAGCTGC CTAAGGATAAATGGTTTTGTTGTGAAGACTGCAATCGAATATATGTGGCTCTTCAGAATTCAGTTTCTGCTGGAGCAGACATTATACCAACTTCCTTGTC AGAACTAATAATCAAGAAGCATGAGGAGAGGGGATTATGTACCTATGAAGGCATGAATGGCATCCAGTGGAGAATTTTAAGTGGGAAGAGTCGTTATCCA GAGCATTTACCTTTACTTTCACGTGCTGCTGCAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCACTATCTGGTCGTGACTTGATTCCTGTTATGGTCT ATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGGATGTATTGCATTGTTTTAATTGTGAATTCTGTTGTTGTATCTGCTGGTCTGCTTAGGATTTTTGG CTGTAATGTTGCTGAGCTTCCACTGGTAGCTACAAGTAGAGAATATCAAGGAAAAGGTTATTTTCAAGCGCTATTCTCTTGCATAGAGAGGTTGCTGTCT TCTCTCAATGTAGAAAAGCTGGTACTTCCTGCAGCAGGGGACGCTGAGTCAATTTGGACTAAGAAATTAGGCTTTCGAAAGATGAGTGAAGATCAGGTAT TCCTGCTTTTTACTGGTTTAGGGGAATTAGATATTATGGAGCCTTTTTACTGAAAACCAAATGAATCAATTGATCAGATCAAAATACAGATAAAATAACA TCAAATTTTCTTGCATTTGTAAGACTATAATTGACATAATAAATCGGCTTCATTATGATTCTTAGTCTTTCTTGGACCTGTATAGTTTGCTGGTTTTAGA TATTCTCTTAGGGTACCCAATATTTGATTCCACATTGAAAGGCTTAAATGCATTAGCTTGTAATAATGTCTAATTGTGCAGGTACAGTGAAGGAATAACA TCCTTTTCATAACTTAAACATGACCTATTTATTCCATTCTACCTTTTGACTTGGTACTGACATATGATAGTAAGATCATGGTTATGGTGACCTGAGTTCC TAATTGGTGTATATAATTCATATTTAAGTTACATCTTTTAATCTCATTCTATTTGCTCTCTAAGATTATGATCATGCATTGACAATTGATTTTTCCCCCT AGTTATCCAAATATCTCAGGGAGGTGCAGCTCACCCTCTTCAATAAAACTTCCATGCTTGAGAAGACAGTGCAGCCGGCAATAGAGTGATGCTTTATCTG TTGTAACTATTTTTTGGTTCTCTATTAATTTTCAAGTATTTCCCTCAATGTAACATTGCTGCTATTCTCTGCTTTTTATTTCTTCCTTTTCGTATTGGTT ATTTTAGAATATGTTGGTTATGGCTGGGTCTTATGGCAGCAACCAGCCAGAGCTCTTTTTTGTACAATGTAGGATAGATAGAAGCGTATGCGTCGAAATG GGGGCTAGTGGCCTTTAAAAGATAGAGATGAAAGCGAGAACGTGCTGACCAATTTTTTTGTTACCATGCACGTCTGTTATAAAGCTTGAATTCCGTATTT TGATTTTGATACCCTGGACAGAATCCTCTGTTTAATGATGAATTCAACTTTATGATTCTTGGCTTTTTATAAGAGCTTATATACCATGGTCAATTGCAG
• Tissue: pods
• Gene name: LI_gene_175021;
• Additional information: details;

Expression of Ll_transcript_279213

FPKM

• PAB: 2
• PNAB: 4.2
• PS1: 5.1
• PS2: 3.7
• PS3: 4.7
• PW1: 3.5
• PW2: 3.9
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279213

• Blastp: Increased DNA methylation 1 from Arabidopsis with 30.89% of identity
• Blastx: Increased DNA methylation 1 from Arabidopsis with 30.89% of identity
• Eggnog: PHD(ENOG410Y0W7)
• Kegg: Link to kegg annotations (AT3G14980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428220.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;