| Id Trinity | TRINITY_DN50150_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_279215 |
| Sequence | GCCTGCTTAGGTTTAGAGTGTGCTCCAGAAAGTTGTTGGCACTGTCTAAACTGTAGAGATAATGTTGGTAATGGAAGAGAATCTTCTATGGTGAGGCCAA TCATGGTACGACTGACACGAGACAATAAAGCTCCAGAGTTTGAAATGGGGGGATGTGTTGTTTGCAGGCAAAATGATTTCAGTGTTGCTAAATTTGACGA GCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGATGCTTGTGGGACATTGGGCTATGTGAGTTGGAAGAGCTGCCTAAGGATAAA TGGTTTTGTTGTGATGACTGCAATCGAATATACTTGGCTCTTAAGAATTCAGTTTCTGCTGGAGCAGACATTATACAAACTTCCTTGTTAGAACTGATAA TCAAGAAGCGCGAGGAGAGGGGATTATGTACCTATGAAGGCATGAGTGACATCCAGTGGAGAATTTTAAGGGGGAAGAGTCGTTGTGCAGAGCATTTACC TATACTTTCACGTGCTGCTGAAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGATCTGATTCCTGTTATGGTCTATGGGAGAAAT ATTTCTGGCCAAGAATTTGGGGGGATGTATTGCATTGTTTTAATTGTAAATTCTGTAGTTGTATCTGCTGGGCTGCTTAGGATTTTTGGATGTAATGTTG CAGAGCTTCCACTAGTAGCTACGAGCAGAGAATATCAAGGAAAAGGTTATTTTCAAGCGCTATTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTCAATGT AGAAAAGCTGGTACTTCCTGCAGCAGGGGACGCTGAGTCAATTTGGACTAAGAAATTAGGCTTTCGAAAGATGAGTGAAGATCAGGTATTCCTGCTTTTT ACTGGTTTAGGGGAATTAGATATTATGGAGCCTTTTTACTGAAAACCAAATGAATCAATTGATCAGATCAAAATACAGATAAAATAACATCAAATTTTCT TGCATTTGTAAGACTATAATTGACATAATAAATCGGCTTCATTATGATTCTTAGTCTTTCTTGGACCTGTATAGTTTGCTGGTTTTAGATATTCTCTTAG GGTACCCAATATTTGATTCCACATTGAAAGGCTTAAATGCATTAGCTTGTAATAATGTCTAATTGTGCAGGTACAGTGAAGGAATAACATCCTTTTCATA ACTTAAACATGACCTATTTATTCCATTCTACCTTTTGACTTGGTACTGACATATGATAGTAAGATCATGGTTATGGTGACCTGAGTTCCTAATTGGTGTA TATAATTCATATTTAAGTTACATCTTTTAATCTCATTCTATTTGCTCTCTAAGATTATGATCATGCATTGACAATTGATTTTTCCCCCTAGTTATCCAAA TATCTCAGGGAGGTGCAGCTCACCCTCTTCAATAAAACTTCCATGCTTGAGAAGACAGTGCAGCCGGCAATAGAGTGATGCTTTATCTGTTGTAACTATT TTTTGGTTCTCTATTAATTTTCAAGTATTTCCCTCAATGTAACATTGCTGCTATTCTCTGCTTTTTATTTCTTCCTTTTCGTATTGGTTATTTTAGAATA TGTTGGTTATGGCTGGGTCTTATGGCAGCAACCAGCCAGAGCTCTTTTTTGTACAATGTAGGATAGATAGAAGCGTATGCGTCGAAATGGGGGCTAGTGG CCTTTAAAAGATAGAGATGAAAGCGAGAACGTGCTGACCAATTTTTTTGTTACCATGCACGTCTGTTATAAAGCTTGAATTCCGTATTTTGATTTTGATA CCCTGGACAGAATCCTCTGTTTAATGATGAATTCAACTTTATGATTCTTGGCTTTTTATAAGAGCTTATATACCATGGTCAATTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_175021; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279215
| Blastp | Increased DNA methylation 1 from Arabidopsis with 28.9% of identity |
|---|---|
| Blastx | Increased DNA methylation 1 from Arabidopsis with 28.9% of identity |
| Eggnog | PHD(ENOG410Y0W7) |
| Kegg | Link to kegg annotations (AT3G14980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461091.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |