Ll_transcript_280099

• Id Trinity: TRINITY_DN50174_c1_g1_i14
• Name Transcript: Ll_transcript_280099
• Sequence: GTAAATAATTAAAATTTGATGGTTTTTGGATAAAAAGAAAAATATTATTTCCTTAACAAAATAACTAACGAAAACGGTGTCGTTCAAGCATGGGCAAGTT CCTCCTGTAATTTCGCTTGACAGATCAAGTTCCTTGTATCTTCCCTCTCTTATTCACTATTTTAACAAACCCTCGCTATTTATCTATCGCTACCGTGGTA GCAAACCCTAATTTCGTAATTAGATTTTTCCCCCGAATTTTTTTTCTGCCGCAGAATTATTGATATGGCTAAGAACTCATTCAAGTTTGAAATACCCCTC GGTGAACTTTATTTTTCTTCTTTTCTTTGTATTTATTTTCTCCAGTTTTTATTATTTAGGTGTTGAGTTTGATAGTGTATTTTCATCTGGGAATTAATCT CTGTGCTTAGGATTTTCGTGTACGAACCTAAAGCATTTGAATTTTCATATACGGGTTTTGTAATTTTTTATCTGGGTTGTGAAATTTTGTATTTTTTAGC CCAATTATGTGTCATTCCTTGAAAAAAATAACTTTTTTAATAGAAATCTTTACTCAATCAAGTGCAGTTGTTTTGTGTTAATTTTATGTTTTTTCTCTTG TCATTTAGTTGAGTATAAACAATGACACATGTTATAAAATTAAATGCACTTTATTTGCTTCTTTTTTATTCCATATGATGCGCTATGTGTTACTTTAATC CCAATGAATTGGTTTTTTGTTTTAACTTTTAAGTTAGATACCCTCTCTTCATCCCCCTCCTAGGGTGGTCTGAAGTTTCTGTTGCCATTGTAAAAGAAAT CTCGTTGTATTTACTTCATACATGATTGTGTAAAAAAATGTTTTTGTTATTAATCTACTAGGTCTAAGTCTAACATATGTTTTCTATTCATACAAATATT ACATTGCCAGAAAGGAGGCAGGCTGAAGCAGTTCGCATAAGAGAGAACTATCCGGATAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGACTGATGTTC CTGAAATTGATAAGAAGAAGTAAGTTTCCTTTTCTTTTTAAGTATTATTATTTGTTTCTTGATTACATTGTTAATTTTTTTACCGTGGTTTAAAAATAGA CACTTAACTGTACCTTACTTTTACTTGGAGTTGAGACATTTTGGTTATATTTTCATTGTGGTTTGGCTGGATTCTAGAACCTTTCAGAGGTTGAGTGTTT TCCTTCTGTGAATGTGGCATCAAATTAAAATGTTCCCGAAGTAGCAAACCTTATGAATTAGTTTTTGACATGGTCCAGAGACCAGATGCACCATGTTTTG TTCTATACACTTAATAATGGTATGGTAGCATAAGATGGGAAAGCAGTAAAGAATGTAAAAAACAGTATTATGATCTTGCATCAAAGAAAATAAGGATCAA TGATTCACTGCTACAGTGCTATGCTGAATTATGATTATATCAGTAGATGCTTTGGTTAAACAGCAACAAGAGAGTTTTGGTTAAGGTTTCAGTTCGGTGT TAACAATTGAAGGTTCAGATTGTTGAAATCTCATGACACAAAAATGACAGTTTAGGAGGTTGGATGTCTTTTACTTACCCTCATATCACCCTCCAAAACA AAAGAAAAAATTGTTGGGCGAAAATCCCTTAAAACATTGGGGGAATAAGTGAATTGGATTGAACACTGATCTTTAGTATAGAGAAGAGCATGTTTGCTAT CTTCTATGTTTTCATTTCCCTAATGTCACTGTTCTTTAACAACCATCTGAATGTTCTATTTTATTTTGTGGATACTGATCCTCTGCTTTCACCTTCTTAT GTCCCCTTTATTTTTGGTATCATTGTTCCCTTTTTGGTTGAATGTAGGTTCCTGGTTCCTGCTGATCTGACTGTTGGCCAGTTTGTGTATGTGGTGCGGA AGAGAATCAAACTGAGTTCTGAAAAGGCCATCTTCATTTTCGTCAAGAACATTTTACCGCCCACTGCGGCTATGATGTCGGCAATTTATGAGGAAAATAA GGATGAAGATGGATTCCTGTATATGACATACAGCGGGGAGAACACATTTGG
• Tissue: pods
• Gene name: LI_gene_175198;
• Additional information: details;

Expression of Ll_transcript_280099

FPKM

• PAB: 1.3
• PNAB: 0.1
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280099

• Blastp: Autophagy-related protein 8c from Arabidopsis with 85.33% of identity
• Blastx: Autophagy-related protein 8c from Arabidopsis with 85.33% of identity
• Eggnog: Microtubule-associated protein 1 light chain 3(ENOG4111JAT)
• Kegg: Link to kegg annotations (AT1G62040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451216.1)
• Pfam: Autophagy protein Atg8 ubiquitin like (PF02991.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;