Ll_transcript_497982

• Id Trinity: TRINITY_DN50213_c0_g1_i4
• Name Transcript: Ll_transcript_497982
• Sequence: GCTTAATGATATAATTAATAATAATAATGGATAATTGATATGATGAGAGTTACGAAGTGTTGCGATTGAAATAAGAAGAAAAAATAGAAAGGAAAAGGAG TTGCGTAACAACACGACACAAATTTGGCAATCACATCAAAAAGACGTAATTCCATTGCTCTTTCCTTCCTTTAACTCCTTCCTCTGCCCCTCACTCTCAC CTTTATCTATTCCTATTTTTTTCTATACACTATTTTGATTCACTGCTGAAACTTGTTTCTATTTCTTAATCTGAGAGAGATTCTATAAAAATATTAGAAG GTGTGTGAGTCCTGAAGAGTGGTGTAATGGCGTCGGGGAAAGTGGTTGGGTTCGTTGGGTTGGATCAATTAAGCGTGAAGATGGCGTCATCGCTCATTTC CCATGGCTATGCTCTCCAAGCTTTTGAGATAAGTGATCCGACGATCGAAGAGCTTTTGAAGCTTGGAGGAACTAGATGTTCAAGCCCTTGTGAAGCAGGG AGAGATGTTGCTGCTTTAGTTGTCCTAATTTCTCATGTGGATCAAATTAAAGATCTAATTTTTGGTGATGAGGGTGTTTTGAAAGCCCTAAAATCGGATA CAGTTCTTATTCTCCGTTCAACCATATTACCATCAGCTCTCCATAAACTGGAAAAGGATCTGGCAGAAATTCATGAGATAGCTTATATTGTTGACGCATA TGTCTCTCATGGGAGGTCTGATGCTATGAATGGAAAAGTTATTATTGCATCATCTGGAAGACCAGATGCCATCGCAAGAGCACGGCCTTTGCTTTCTGCA ATGTGTGAAAAGCTTTTCACTTTTGATGGTGAAATTAGTGGTGCCAGTAAGGTTAAAATGGTCACTGAGCTGCTAGAGGCCATTCACTTCATTGCTTCTG TGGAGGCTCTTTCTCTTGGTACTAAAGCTGGTATTCATCCGTGGATAATCTATGATATAATTTCCAATGCCGCTGGAAATTCATGGGTATTCAAGAATAA TGTTCCTCTATTGTTGAAGGGAGAGGTTAAGCATCACATTCTAAAATCTCTTGTTAAGGAGCTGGAAATCATTTTGGATATGGCCAAGTCACTTACTTTT CCACTTCCACTTTTGGCTGCTTCTCATCAACAACTTATTCAAGGTGTTTCAGTTTCAACTGTTTGTTGTGAAGATGATGATGATGGTACAGCATTGATTA AGGTTTGGGAAAGCATTTATGGGGTGAAGTTTTCAGATGCTGCAAATGCAGATGCATACAGCCCTGAAAAACTGGCATCTGAAATTACAGCTGATTCTAA GAGTGTAAAACGGGTTGGTTTTATTGGCCTTGGAGCGATGGGATTTGGCATGGCAACTCACTTGCTGAGTTCAAATTTCAGCGTAGTTGGTTATGATGTG TATAAACCAACTCTAATTCGATTTGCCAATGCTGGTGGCTTGATTGGAAATTCTCCAGCAGAAGTGGGTAAAGATGTTGATGTTCTCATAATCATGGTCA CAAACGAAGCTCAAGCAGAGAGTGCCTTATATGGAGAATATGGTGCAGTTTCAGTACTTCCACCGGGAGCATCTGTCATTCTTTCTTCTACTGTTTCTCC AGCATATGTGAGTCAGCTAGAGCGCAGATTACATAATGAAGGTAAGAATTTGAAGCTGGTGGATGCCCCTGTTTCTGGCGGTGTTAAGAGGGCCTCAATG GGAACACTTACGATAATGGCTTCGGGGTCCAATGCTGCCCTTAAGGATGCTGGTTTAGTCCTAGCAGCCTTGAGTGAGAAGCTTTATGTTATCAAAGATG GTTGTGGTTCTGGAAGTGGAATAAAGATGGTCAACCAGTTGCTCGCTGGAGTTCATATAGCATCAGCAGCTGAGGCAATGGCTTTTGCAGCACGGTTGGG TCTGAATACAAGAATTCTGTTCGATTATATAACAATTAGTGGGGGAACATCCTGGATGTTTGAAAATCGTGTCCCACACATGCTAGACAATGATTACACA CCATATTCAGCACTTGATATCTTTGTTAAGGACATGGGAATTGTTACTCGTGAATCATCTTCTTGGAAAGTACCACTTCACCTATCAGCTACTGCTCACC AACTATATCTATCAGGTTCTGCTGCTGGTTGGGGACGGCAAGATGATGCTGGTGTGGTGAAGGTTTATGAAGCATTAACTGGTGTTAGAGTTGAAGGAAA ACCACAAGCTCTTAAGAAAGACGTTGTGTTGCATTCTCTTCCACCCGAGTGGCCACAAGATCCTCTTCCTGATATAAAGAGACTAAACGGAATCAGCTCA AAGGTTTTGATTGTTCTAGACGATGATCCAACAGGAACACAAACTGTTCATGATATTGAGGTATTAACAGAATGGAGTATTCAGTCACTGATTGAGCAGT TTAGAAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCTCTGAGTTCTGAGAAGGCAAGTGCATTGATAAGAGAAATTTGCAGAAATCTAGC TAGTGCAGCAAAATCAGTTGACAACATTGATTATACAGTAGTTTTGAGGGGAGATTCAACTTTGCGTGGTCATTTTCCAGAGGAAGCGGATGCTGCTATT TCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGTGGCCGTTACACTATCGAAGACATACACTATGTTGCTGATTCTGATA TCCTTCTTCCTGCAGGGGACACAGAGTTTGCCAAAGATGCTTCCTTTGGCTATAAATCTTCAAATTTGCGCAATTGGGTAGAGGAGAAGACAGGTGGGCG AATACCTGCAAGTGCTGTTGAATCCATTTCTATCCAACTTTTGAGGAAAGGGGGACCAGATGCAGTTTGTCAACATCTATGCAATTTGAAGAAGGGATCA GTATGTATAGTTAATTCAGCTAGTGAAAGAGATATGGCTGTATTTGCACTTGGAATGATCAAGGCAGAATTGATGAAGAAGCGTTTCTTAAGTCGCACTG CTGCTAGTTTTGTTTCTTCCCGCATTGGAATCATCTCTAAGCCTCCAATATTGCCAAAGGATCTCGGAATAGCTAGAGAAAGGAATGGTGGTTTGATAGT TGTGGGATCATATGTTCCAAAAACAACCAAGCAGGTTGAAGAGCTTAAATTAC
• Tissue: pods
• Gene name: LI_gene_175491;
• Additional information: details;

Expression of Ll_transcript_497982

FPKM

• PAB: 0
• PNAB: 4.4
• PS1: 10.7
• PS2: 3.6
• PS3: 0.1
• PW1: 3.3
• PW2: 3.5
• PW3: 7.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497982

• Blastp: L-threonate dehydrogenase from Cupriavidus with 49% of identity
• Blastx: L-threonate dehydrogenase from Cupriavidus with 49% of identity
• Eggnog: Dehydrogenase(COG2084)
• Kegg: Link to kegg annotations (H16_A1562)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457928.1)
• Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase (PF03446.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;