Ll_transcript_497430

• Id Trinity: TRINITY_DN50217_c0_g3_i6
• Name Transcript: Ll_transcript_497430
• Sequence: CATATGTTCTCTAAAGTCTTAACAGAACACATTAATACAATTCTTCTTGGATCTGCTGAGATTCATTTACACTTTGCATTGGTACTAGTTTTTTACATTT AGGTGGTGCTTCAATTTTGTGTTTATGTTCCTCTTTATGTGTTTATTGTTAGGGCCTTAGGGGCTTATTTTCATTTGGCCTTTTCTGGTTATCATCATGC ATGGTAATGTCTGCTTTGTTTTGTGAAAGAAAAATACCCAAAAAGGGAATATAACTCATAATTGGAAATTCTTGGGATTGCAGTTCAGTCCTAAAAAATT GTTTCTTTTCATCTTTTGTGAGAAGCCAATTCTATATAGTATAGCTGCATTTCATGAAATTTAATTAAGGTTGAACTGTGGAACCATGGAAAGTATTTGA TATCAAAGATTCATTGGGGCCCTTGCAATTTAGCAAAACAAATTGTTTATCTTCAGCTGGCAAAGGAAACCACTTTCTGGAAGCTGTTTATATATAAACC TACTCAATTGAATTGTACCTATCAAGGGCAGAGACAACATGTCAACATGAATTGTGGCCTGGACCAAACTTTTGAGAGTGGTACTGGTACAAGATAAAGG AGATTCATTTACTTATCTTCAACCACACAAAAAGATTCTATTTTTGGATGGTAAGGACTAAGGAGTGAGGACTAAGGACCGGTGTGTGATTTCGAGCTCT CGCAATTTTGGATTCTATGGTGTATTAGTTGAACCAGAATCCTTTTCCTGAAAGTGCTTTGCAATTTGCAGTGTTTTTTTTGGTGTACTTGTGTTAGTAG ATTTGACTTTTGAGAGTAATAAATGATAGAGCTTCTATGGGGAATGAGTAATTGTAATTGGTTGTGGTAGTTGAGGAGGAAGTTGAGTTTAATTGAAAGA AGAAGAAGAAGAAGAAAAAGTAGTAGAAGAGGTGTGGATATGGCTGCAAAGTTTCTACATTCTTCAGCAGATGATAACACTGATTTGCAGAAACAGATTG GATGCATGACTGGGATTTTTCAACTCTTCGATCGTCATCATATCGTTACTCCTCTTCTCATTAGCCACAAGAGGCTTTCTCCGGGTAATTCCCACTTCAA TCATGACAACCTGGAAAGAGAGTCTAATGGCATACGCCATCGACAAAAAGGGCCCGATATAAGCTTAAACAAGGGTGTTAGTGAAAAACAAAGAGTTTCA ACAGAATCATCAAGAGTTTCATTCTCTTCTTCCGGTTCATCATCGATGTCGTCTCTGGACTTCAAAGCTCAAGTAGATGCTCACTATGACCAGATTAATT TTCCGGAACCTGCAATGAGGGACACAATTATGAACCAAAGAAGCACCTCTCCTCATTTAGGACGCCAGTCCCTTGACTTGAGGGATGTGGTGAAGGACTC GATGTATAGGGAGACTAGAGGACTATCATCGAGGACGACTGCCAAAGAGGAAGCCGCAATTTGTGTCATGAAGCACAGGGATTCTCCGAGACCTCTTCAG CTGTACAAATCTGATGGATATGATAGAGTTGGAATAGATGGAAAACAAAGTGCTCCTATAGATGTAAAGGACTCTCTCCGAGTCCTTGCTAAACTTAGAG AAGCACCTCGGCATTATGGTGAAGCAATAGAGCCGTCAAGATTATCATCGTATGAAGTAAAAGATGGAGGAAACTGGTATTCTATCTCAAAGGATGCGCC TCGGTTTTCTTATGATGGAAGAGAAATGAGTCGCTTATCTTTCGAAACAAGAGAAACTATCAAATGCCAACCAAAGCTGCCAGACCTTCCTAGACTTTCA CTGGACAGTAGGCAAGGTTCTTGGAGCACATACAACCCTGATTCAAAGAAACACAGTCACTTAAGAAATTCCAGTACTGGTAACTCCACCTCAGATGAGA GTCTCTCTAGTCTACAACAGTCTTCAGCAACGCAAAGCCGGCCACCTAGTGTTGTAGCAAAACTAATGGGCTTGGAAGCGTTGCCGGAGTCCTATTTGGC CAATGAAAGTCAATCAAATTTGAGTGAATCTGGCTCGACTCGAGGTAATGGTCAGTTTTCAGGATCATCAAAAGATGGATTCATTAGGCCACTTCAAATT TCTAATTCACCGAAAAGTTCATTGAAAGACCTGAATTCTCCACTGAGGAAGAATCCTGATGTGGTTGTGAAACCAATCTCAAGGTTTCCCATTGAGCCTG CACCATGGAAGCAGCAGGATGGAAACAGAAGCTCCAAGAAACCAAATTCCAAGGCCTTAAAAGCTCCAGCAAAAACACCAGATTCATTTCCTTCCGTTTA TAGTGAGATCGAGAAGAGATTGAAGGATCTGGAATTTAAACAATCTGGAAGGGACCTTAGAGCACTTAAACAGATACTGGAAGCAATGCAAGTAAAGGGG CTGTTAGAGACTAGAAAAGAAGAACAGGCTTCAAACATTGCTGGAAGTCAAAGAGAGTATGAATCAAAACCTTCGAGTCTAATTCAGAATTCACGGTCAA CAAAGCAGCAAAATTCACACGTAAACAATCTTGTACTCAACACAATTAGGGGATCTGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATCATGAAACC AGCAAAACTTATTGAGAAAACCAGAACTTCAGCGTCTTCGGTCATTCCAGTTGTGGGCCTTTCTGATCATAGACTCCAAAGTGGTTGCAATGTGCATGTA AATAATAAAAAAGGGACAGCTTCTGGTCCAATAGCAAAAGATCAGTCGCCAAAAACAACTCGCAGGGATGCATCTACCAGTTCCGGTGCTAAGAAAGCTA GTAGTAGTAGCAAGACTACAAAATCAACACAATCACTGCCAAGGTCTCAACAATTTCCAGGTTCAGTGAAGAACTCAGGATCTGTAAGCCCGAGAATGCA ACAGACGAAGTTAGAATTGGAGAAGCGATTACGTCCGCCTGCCCCACCATCAGATTCAAATAAACCAAGAAGGCAATATGTTAAGCAGGCAACAGAATTA GTTTCACGAGGCCGAAAACTGAGACAAAAAGTGCCTAATAAACAGCACAGTGATGACCAACTGAGTGAGATCAGCAACGAGTCAAGAAGTTTAAGTTGCC AAGGGGATGAAATGTCTCAGAAATCAGACAGTATAGCTGACAATTTGAACATTGATGTGGAAGTCACCAGTAGTTTACGATCTTCTAGAATTATTAACCA AAGCCCATCTTTGAAAGCTAGTGAGCAGTTGGTTTCAGGATCAATGCACAAGAAATCAACTCTGAGGTTGGATGAGGATGAGTCAATTGCAGAACTTGCA ACAGATGGTCAAGATCATCCAAGCCCAGTTTCAGTTCTGGATGGATCAGAATACACAGATGATGTGCCCTCCCCGGTAAAGCGTATATCCAATGCTCCGA AAGTAGCTGGTAATGCTGAAGAATCTAAAGAAACCAATCATAGAGATCAGTGGAGCCCCGCGGATAGCTTTTCATTCGACAGCACTGGAACTGGAGAGAT CAACTGCAAGAAATTGCAGAGCATAGATCACCTTGTTCAGAAGCTTAGACGGCTAAACTCAAGTCATGACGAATCTAGAATCGATTACATCGCTTCCCTT TGTGAAAACTCAAATCCAGACCACAGATACATATCTGAAATACTGTTAGCTTCAGGTCTCCTACTCAGAGATCTAAGTTCTGAATTGCTCACATTTCAAA ATCACTCATCAAGTCATCCCATCAACCCTGAGTTATTCCTTGTATTGGAGCAGACCAAGGCAAGTAGTTTGCTTTCTAAACAAGAAATCTGCCCCGGAAA AGTTGCATACACGAAGCTGAATTCCGAAAAGTTTCATAGGAGACTCATCTTTGATGCTGTAAATGAGATTCTAGGTGCAAAATTATGCTCTTGTCCTGAA CCATGGTTGAAGACTAATGGACTATCAAAGAAAACCCCGAGTGCGCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAGAAAATGCAAGCCAAGAAAC AAGAAATGAGTATAGAAGATGAAGGGGATGGTCTAATAAGTATGTTATGGGAAGATGTGATGCATGGGTCAGAAAGTTGGACAAATTTGTATAGTGAAAT ACCTTTGGTAGTGTTGGATGTTGAGAGACTCATATTTAAGGACTTAGTTGATGAGATTGTGATTGGTGAAGCTGGTAACTTGAGGAACAAGTCAAGTAGC TGCAGAAAGCTATTTGGAAAGTAGTTCATTATATTCTTCCCATTTTCACTATTCTTGTCATAAGAGTTTGCATATTACAGCTTTGTTTATTTTTGCTAAG TTGTAAAGAAACTTAACTTACTTACCTTGGATTTATAGAGTACATATATCAAAATTTGCAGTGTTTTGAAA
• Tissue: pods
• Gene name: LI_gene_175519;
• Additional information: details;

Expression of Ll_transcript_497430

FPKM

• PAB: 0.1
• PNAB: 2.9
• PS1: 4.1
• PS2: 2.7
• PS3: 5.5
• PW1: 1.3
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497430

• Blastp: Protein LONGIFOLIA 2 from Arabidopsis with 30.55% of identity
• Blastx: Protein LONGIFOLIA 2 from Arabidopsis with 30.01% of identity
• Eggnog: NA(ENOG411078I)
• Kegg: Link to kegg annotations (AT3G02170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451756.1)
• Pfam: DUF761-associated sequence motif (PF14383.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;