Ll_transcript_499345

• Id Trinity: TRINITY_DN50258_c0_g2_i1
• Name Transcript: Ll_transcript_499345
• Sequence: TTATATAAAAAACTACTCTTCAAAACCATCCACTTTTCATTTCTCTCAGATCACTTCTTCTTCCACTATTCTCTCTTTCTATCTCACCGGATTTTCTTCG CCACCACCAAAGAAGTAAGACATTGTAGAGAAGGTCTGCCCATCAGCCATGGCATCGAGATCATTTGCTAATCTCCTAGACTTACTTGGAGATTTGCCAG ATATTCCTCACACCCCAAGAACACTTCCAAGGGTTATGACAGCTCCTGGAATTATTTCTGACCTAGATGTTTATGGTAGAAATGATGTGGGTTCAGATGT TAGCTCTTCTGGTTCCGGGTGTCGAGAACGGAAAATCATAGTAGCGAACATGTTGCCGTTGAAGGCTAAAAGAGATATAGACACTGGTAAATGGTGCTTC AGTTTGGATGAGGATTCAATTTTATTGCAATTAAAAGATGGGTTTTCTTTTGACAGTGAGGTGATCTATGTGGGGTCCCTCAAAGTTGAAATAGATGCCA GTGAGCAGGAAGAAGTTGCTAAGAAGTTACTGGAGGACTTCAATTGTGTGCCTACCTTTCTACCCCATGACCTCCAGAAAAAATTCTATCTTGGATTTTG TAAGCAGCAGCTCTGGCCTCTCTTTCATTACATGCTACCTATGTGCCCTGATCATGGTGACCGGTTTGATCGCTCGCTCTGGCAGGCTTATGTTTCTGCA AACAAAATATTTGCAGACATGGTTATGGAAATAATCAATCCCGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGGTGTTGCCTACATTCTTGA GGAAGCGATTTAATCGAGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGAAATTCTGAA GGGTTTATTGAATTCTGACTTAATAGGGTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTAGGTCTGGACTATGAATCT AAACGAGGACATATAGGACTCGATTACTTCGGCCGTACTGTATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTGTTAAATC TTCCTTCTACATCTGCTAAAGTTAAAGAGATTCAGGAAGAGTTTAAGGGTAGGAAGGTGATTCTCGGTGTTGATGACATGGATATTTTTAAAGGCATCAG TCTAAAGCTTCTAGCTGTGGAGCATTTGCTGCAGCAGAATCCAAATTTGCAGGGCAAAGTTGTCCTAATTCAAATTGTGAACCCTGCAAGGGGTTCAGGG AAGGATGTTCAGGAAGCAAAGAGGGAGACATATTTAATTGCCCAGAGGATCAACGATATTTATGGTACAAACCATTACAGGCCAGTTATTCTCATTGATC GTCCCGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTAGCAGAATGTTGCATTGTTAATGCAGTAAGGGATGGTATGAACTTAGTCCCATACAAATA TATTGTTTGTAGGCAAGGAACTGCACAAATGGATAAAGCACTAGGAAGAACAAGTGATTCTCCTCGTACGGGCATGCTTGTTGTCTCAGAGTTCATTGGT TGTTCTCCTTCTCTAAGTGGGGCAATCAGGGTCAATCCCTGGGATGTAGATGCTGTGGCTGATGCACTGTATTCAGCCATCACAATGTGTGATTCAGAGA AGCAATTGAGGCATGAAAAACACTTCCGGTATGTCAGTTCTCATGATGTGGCGTATTGGGCTCGCAGCTTTATGCAAGATTTGGAGAGAGCATGCAAAGA TCATTACACCAAAAGGTGCTGGGGAATTGGTTTGGGCCTAGGGTTTAGAGTTGTTTCACTTTCTCCTGGTTTTAGGAAGTTGTCCATGGACCACATTGTT TCAGCATACAAAAGAACCAATAGAAGGGCCATATTTCTTGATTATGATGGTACTGTTGTACCACAATCTTCTATAAATAATATCCCCAGCCCTGAAGTGA TATCTGTGCTAAATGCTCTGTGTAATGATACCAAAAACACTGTGTTTCTTGTTAGTGGAAGGGGAAGAGATTCTCTTAGTGATTGGTTTTCTTCATGCAA GAGGATGGGACTTGTGGCTGAACATGGGTACTTTTTAAGGTGGAGTGAAGATTCTGTATGGGAAACGACTAACGTGTTTGCGGACCTTGATTGGAAAAAC ATCGTGGAACCTATCATGCAATTGTACACAGAAACAACTGATGGTTCCAATATGGAAATTAAGGAAAGTGCGTTGGTGTGGCGTCATCAAGATGCAGACC CTGATTTTGGCAAGAGCCAAGCCAAAGAGTTGTTGAATCACTTGGAAAGCGTGCTTGCCAATGAACCCGCGGTTGCTAAGAAGGGCCAGCATGTTGTTGA AGTTAATCCTCAGGGAATAAGCAAGGGTTTGGTTGCTGAAAAAGTTCTTTCGACTATGGTTAATGGTGGCAATCTACCAGATTTTGTAATGTGCATTGGA GATGATATTTCTGATGAAGACATGTTTGAGAGCATATTAAGGACTGTCTCATGTCCATCATTACCAGTAGCCCCTGAAATCTTTGCCTGCACTGTTGGCC AGAAGCCTAGCAAAGCCAAATATTATCTTGATGATCCTTCTGATGTCTTAAAGTTGCTTCAATGTCTTGGTGCTTCTTCTAATCCAAAGCCCAGACATCT AGCGCAATTCCAGGTTTCTTTTGAGAGCAGAGTTTGAGTTAAGACATGGCAACACATCATTATTGGTCTTGTTTGAATCAGGGAATGTTTGGTTATTATC ACTTAACATTACACATGGTGGGACCTTGCTGTTGCAGATCTGGTTCTTTGCATGTGAACCGTTTTGCATTGCCTCTGGAAACTTTCCTTTTTGGGTTAGA CAGTGTAGTTCATGGATGACATGTCAAATCTTCTCATGTACATGGTAACATTAATTGTTTGTATTTGCTGGTGTCTCATGTAGTTTTAGGTTAGGTGTGT TTAGTATTTTAGACCTTATAGCTGTTTACCTTGAATGTAGGACACCAATAACTTGTACAGTTACACTATCCTTGTTAACAATACAAAAATGTCAATCTGT TTTGACATCTCTTGCTTTAGCCTAATGAGTAATCCGTGACCAAATAAAAACAAAATTCTTAGAAGGGTAACTTTAAGTCCCAC
• Tissue: pods
• Gene name: LI_gene_175849;
• Additional information: details;

Expression of Ll_transcript_499345

FPKM

• PAB: 65
• PNAB: 12
• PS1: 30.5
• PS2: 17.6
• PS3: 28.5
• PW1: 13.9
• PW2: 32.8
• PW3: 42.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_499345

• Blastp: Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 from Arabidopsis with 72.65% of identity
• Blastx: Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 from Arabidopsis with 73.47% of identity
• Eggnog: synthase(COG0380)
• Kegg: Link to kegg annotations (AT1G60140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421262.1)
• Pfam: Glycosyltransferase family 20 (PF00982.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;