Ll_transcript_497917

• Id Trinity: TRINITY_DN50275_c2_g2_i1
• Name Transcript: Ll_transcript_497917
• Sequence: CATCACACCAAACACAACACAGCTACTCCGATACAAGGTGATAGAGAGAGAGAGAGAGAGAAGAAGAAGAAAGAAGAAGAAAAAGGAACTCAGATATTCC ATTCCCGAATACAACAATCACTCCACTGATCCACTCCCGATCTGCGCTGCTGCTCATTAATTCCTTTATTATCTCATTCCAAACCCTAATTACTCGATAG CCATACCATAGCCCCTTGCCTTTTCAATCATGCGCTTCCAACTACTATGAGGAACACTCTTTCCCGTAATTCTACTATTCCTACTACCACTACTCTTAAT ACTAATACTAATACTAATACTGACAATCACAATAATAATAATAATAGAACATTAAGGCTGTCCTCACCTCAACCATCTCTTAAACGATTCGGATTGTGTT CCCCTATCGTCTTCCCGGAAAGGCGAGGTGCCAAACTCAAGGCTTCTTCCACTGATGATCACGCCATAGATACATCCAAGGATTTTGAGCATAGGATTCA CATAGGAGGAAGAGGAATTCCAGCACCTGGAGATGAGAAGTCTGATTTATTAGGATATGTCGTGTTCTCTGGAAAACTTGCTTTGGATAAGAGAAAGCTT ACTACCGTCAACAACAACAAAAACAACAGTGCTGCTTCTCAACAAACCTCTTCTGATACTACCATCAACCAACAAGCTGTTGATGCCAAACTAACAAGCA AGGCTCTAGTTTGGGGATCCCATCTGCTCAACCTTGATGATGTCATCTCGGTTTCTTATAATGTGGGTCTCAGACATTTTACAGTGCACTCGTATCCATT CAAAAAGCCTTCTTGTGGTTTTTCTTGTTTTATAAAATCACAAAGAACTCGTAAGGACTTTCGCTTTGTGGCCTCTAATTTCCAAGAGGCCGTTCAATGG GTTGCTGGATTTGCAGATCAACAGTGTTTCGTCAACTGTCTTCCTCACCCTTTAGTGTCTTCCAAGAAGCAAGCATCCTCCGAATTGCTTCCTACCGATA CCCCTCCTGAGTTGCTCTTCAGATGTAAAACTCCTCCCAAGATGCTTGTCATTTTAAATCCACGATCAGGTCGAGGTCGTTCAAGTAAAGTTTTCCATGG CATTGTTGAACCAATATTTAAGCTTGCTGGGTTCAGATTAGAGGTAGTCAAAACAACATCTGCTGGTCATGCTAAAACTATTGCATCAACGGTTGACATC AGCACTTGCCCTGATGGAATTATATGTGTTGGTGGTGATGGGATAATCAATGAGGTTCTTAATGGTCTACTTAGTAGAGACAATCAAAAGGAAGGAATAT CTATACCTATTGGAATTATACCAGCTGGTTCTGATAACTCATTGGTATGGACTGTTCTTGGAGTTAGAGATCCAGTTTCTGCAGCAATGGCAATTGTAAA GGGGGGCCTTACTGCTACAGATGTTTTTGCTGTTGAATGGATTCAGACTAATAAAGTTCACTTTGGATTAACAGTTTCATATTATGGTTTTGTTAGTGAT GTACAGCTATGAAGTTGAATATCTTCCAGCATCAAAAACTGAGAGAGGAGGAAATCTTTCAGTTGAAAGTGAAGTGGTTGACATGTCAGATCTTTATACC AACATCATGAATAGATCAAATAAGGATGGGCTGCCCAGAGCATCTAGTCTTTCC
• Tissue: pods
• Gene name: LI_gene_175959;
• Additional information: details;

Expression of Ll_transcript_497917

FPKM

• PAB: 3.2
• PNAB: 6.5
• PS1: 8
• PS2: 4
• PS3: 6.8
• PW1: 4.9
• PW2: 6.3
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497917

• Blastp: Sphingoid long-chain bases kinase 1 from Arabidopsis with 66.99% of identity
• Blastx: Sphingoid long-chain bases kinase 1 from Arabidopsis with 67.17% of identity
• Eggnog: diacylglycerol kinase(COG1597)
• Kegg: Link to kegg annotations (AT5G23450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452861.1)
• Pfam: Diacylglycerol kinase catalytic domain (PF00781.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;