Ll_transcript_496833

Id TrinityTRINITY_DN50291_c0_g3_i1
Name TranscriptLl_transcript_496833
SequenceCTGTGTTCTTTAAACCATAAACCCTCTTTCTCTCTCTTTCTCTTCCTCTCACGCCGTCACCACTATCATTCCTTCACTGCAATAACTTCAACCCAAGTCA TGGTTCAAACAACAGAAGGGGCAACGAATTTCGTTGAAGCGGTTGCGTTCAGTTTTTTAACTCATCAAGAGTTGAAGAGGAGTAGTTGTGTAACTATTAA AAATCCCATTTTGCTCGATGGTCTCGATCGACCTGTACCTGAGGGATTGTATGATCCTGCTTTGGGTCCATTGGATGAGAAATCTCCTTGTAAAACATGT GGTCAAACCTCGAAACATTGCCCTGGTCACTTTGGTCATATTGAGCTCATTTTACCTGCATTCAATCCTTTGATGTTCAATATTCTTAAAAATCTTCTAC AGATAACTTGTTTCTCTTGTCATCGTTTTAAGGCTAGCAGACCTGAGGTGGACTTGTGTACATCCCAATTGGAGCTCATTATAAAAGGGGATATTATCAA AGCCAAAAATTTGGGTTCACTTAATCCAGAGGAAGCCATGCATCTGGGTGATGATGACAAGAGCCAGTGTTTTAGTGCTGAACAAATGGGAGAAAAATGG ACTTCCCTTCAATTTAGTGAGGCAAAGTCTGTTCTAAGGAAGTTTCTAATCAAGAAATATAGGAAGTGTCAAAATTGCAAATCCATCAATCCTAAAATCA CTACACCAACCTTTGGATGGTTTCATAAGACTGTTCTTTCGGCTGCTCATACAAGATCAAATATCATTAATGCTCAAGATGAATTCATGTCAAGTGAAGC TATCAATGATGATATTTCTTTTGAAAACGGGGATACTACAGATGTAGAGGATGTTGCCTTGGATGGGACTGGTAAAAGTGCTTCTAAAAAGCATAATTTG TCTCACATGCTCGCTAAGCTAGACGAACGTTCTGGGTCTTTCTTACCATCAAAGGTTAAAAGCATTTTCAAGCATTTGTGGGAAAATGAGGCTCGACTTT GTTCTTATATTAGTGATATTCAAGGTCAGGGGTTTGGAAAGAACACAGGTCCGTCAATGTTCTTTCTGGAGAATATTTTTGTTCCACCAATCAAATTCCG TCCCCCTACCAAAGGAGGTGATAATGTAATGGAGCATCCTCAAACTGTTCTTTTGACTAAGGTTTTAGAGTCAAACGAGTCCTTACGAGATGCGTGGCGT GCATATCTAGACGCATCAGGTTCCTCAAAAGTTGTAAGCAGCCGGTGGATGGAACTTCAGAAATCCCTGAACATCCTAATTGACAATAAAACATCTGGTC AAAAAGAAGCTGCTACAGGAATTTGTCAGTTGCTGGAGAAGAAGGAAGGCATCTTCCGCCAGAAAATGATGGGAAAGAGGGTCAATTTTGCTTGCCGCTC TGTCATATCTCCTGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTCTAAGATTAACTTATCCTGAGAGAGTCACTCCTTGGAAT GTAGCCATGTTAAGGGATGCTATCCTTAACGGTCCTGAGTCGCATCCAGGTGCCACACACTATGCTGATAAAGTTTCAATAGTCAAGCTTCCTCCAAAAG GGAAGATGCTTTCTTTGACATCAAGGAAGTTACCTTCCTCTAGAGGGGTTATTTTGCAACATGGGAAGATATCTGATCAGGAATTCGAAGGTAAAGTTGT ATATCGCCACTTGAAGGATGGTGATATTGTACTCGTCAATCGACAGCCTACACTTCATAAACCTAGTATAATGGCGCATGTAGTTCGTGTTTTAAAGGGG GAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATTAATGTTCATTTTCCACAAGATGAAATTTCCC GATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCAGAGCCTTGATTCAGGATCATATTGTAAGTGC TGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGGTGTATCCATGGCTGGGATTGGCTCTTTCTGT GGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATATGGAAGCCAGAGCCGCTATGGACAGGAAAAC AGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGAAT CAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTGTA GTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCGTT TATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAAAG CTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAAAA ATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACTAT CTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCTCA TCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAGGA GGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAAAA CATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTTAT CCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCAAC TTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAACA CTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCTCA GTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAGAG ATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGCAG ATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATATAA GCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGGAG TTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTCAG AAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGATCT TGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGGAT TTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGGTG GTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAGAA AAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTCAC ATTTTGTTGGCTCAGATTGCTCAGAAATCTGCTAAGAAGGTTTGCATCCAGAAGTTTGGAAAGGTTGGCGAATGTAAAGCTATTACATGCAAAGAAAGTG GAGTACTCTACAATGGTGAAGATGAAGGTAAGAAGGATGCAGAGAAAATACCAGCACTTCAGACATCAGGGATACATTTCCAAACATTCTGGGAGTTGCA AGATGATCTTGATGTTAACTATGTTTATTCAAACAACGTCTCCGAAATGCTAAATGCTTATGGGGTGGAAGCAGCCAGAGAGACCATCATAAGGGAAGTA CAAAATGTGTTCAAGTCTTATGGGATATCAGTAAATATCCGGCATTTGACGCTTATTGCGGACTTTATGACACACTCCGGTAGCTATCGTCCAATGAGCA GAATGGGTAGCATAGCGGACTCCACATCCCCTTTCATCAAAATGTGCTTTGAGACAGCCTCCAAATTCATTGTTGAAGCAGCTTATCATGGACAAGTGGA CACATTGGAAACTCCTTCAGCTAGAGTTTGCCTTGGTTTACCAGTAAAAATGGGAACTGGGTGCCATGAGCTGATCCAGAAGGTGGAAATATGATATAGC TGCCATGTTCCTCAGCTCAGACCTGTGGCAAGATTTTGACACATTACACAACAAAGTTTTGTTTGAAAAAATTAAATTGTCTTGGAGGTAGTGGTATTAT TATTGTATTAAATGCCATGCCTGGTGCAATATACAAGTGGTAGAAAGAATAGCTTCTTGTTCCTGTGCCATTTTCCTGATTATTTTAATATATTGTATAA CATATTGACATGTAATTTTATTTCAATGTTTTTACTTAGCTTTGATGATTTAAAGTATACTTTGTGGATGACCTTATTTAAGTTGTATGCAATTACCCAT TTTCATAAATTATACATTATTTTCT BLAST
Tissuepods
Gene nameLI_gene_176089; 
Additional informationdetails; 

Expression of Ll_transcript_496833

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_496833
BlastpDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.14% of identity
BlastxDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.5% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT3G57660)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421167.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;