Ll_transcript_498561

• Id Trinity: TRINITY_DN50292_c0_g3_i2
• Name Transcript: Ll_transcript_498561
• Sequence: AAGATGATGAAGAGGACGATGATGATGACAATGAGGATGACGACAATGCAAATGATGATGTCGCAAAAATGATTAGGCAAAGAAAATTTTTACGTGCGAA ATTTGGCGAAGGTGGTGATGAAAGTCACGATGATGATGAAGATGAAGACGAGGAAGATTATAATAAACTTACTTTCGGTGGGAAAAGGTTCTCTCACGGC GCTGAGAATCGTAATTTTGAGATTCAATCGAGTGATGATGAGGCCCCAAAAGAGGAGGAAGAATTGGCTTTACAAATACAAAGGGAGAAGGCCAGATCTT TAACAATGGAAGACTATGACCTAGGCGATATTAGTGTAGACAAAGATAATGAGAAATTAACTTCGAAGGATGCATCAGGTAAAGATAAGGGAACAATAAA GTCACCAGACAGAGATATAACTTACAAGCTTGAGGACCTGAATGCTTTGTCAAAGGAGGAGCAAATGAACATTCTGTCTAGGTCTGCTCCAGAATTAGTT GGTTGGTTGTCAGAACTAAACGAGGCTCACAAGCAGCTTGAATGCAAAATTAACCCATTTTTGAGCAAGGTTAAAAAGGGAGAAACGGGTATAGAAGGAG GAGTGCAATATTTTGAGTTGAAGCAGATTCTGTTGCTGTCCTATTGTCAAGCTATAACTTTCTACCTTCTCCTCAAATCTGAAGGGCAGCCAGTCCATGA TCATCCTGTCGTAGCTCGCCTCGAAGAGATCAAGTTATTAGTAGACCAGATAAAACAAATAGACTCTAAACTTCCAGTGGAACTTGAGGACATTCTTACC AGAAGTGATGAGTTAGTAGGAGTAGTGAAGCCAGATAATGAGAATGCTCTATCAAAAACCAATTCTTTTACTAAAAACCAAGAGCAGCCTCTTGTCTCTG ATGGATCACCTGATGAAGCAGTGCCTCACAAGTTAGTTGAGATACAAAAATTGGAATCTTCAAAGGATAATGCACAGAAAGCAAGAAAAGATAAACATCA GAAGGATAGCGTTAGCGTGCAGAGTTTGGAAATGTTAAAAGTTAGAGCTTCCCTTGAGGAAAAGCTTAAACAAAAGGGTTTGTACAGTTCGATCACTCCA AAGCCTAGTAGCACCCGAAAACGTTCAAGACCAGTTAATGGACAGCTGGAAACATTTGATGATTTTGATGATGATGCTGCTGATGTTAAGGGGGCAGTTA GATTGGTTAATGGTTCCAGTAAAGTATCCCAGATTCTTAATGCTAATTTGAAGAAACCAAAGGTACTGAACTTGAGATTTTTGTAAGAGTGATTCTAATT TCATTCGTAATTCATAGTAACCTGCATACTGCAAGGTATTTGAGTAAAAGTTTCATTGCAAGGTTTACCTATTCCTGGCAGAAAATAATTAAGTTATAGA TGCAATCTGAGCAGGATAAAATTGGTGCAGAAAGTCCTGCTTGCAAGTATATGTGTTCGTTATACTTTTAATAGATCCTGCAGCAAGTCTCGGGATGGCT CTCTTATAGTGAAATGTTTTAGTATATTTACATTATCATTATATTACAATAGTGTTATACTAATAAATACAGAGGATATAATATAACATGAGGTGAACCA CTGCATTGATCTTTGACCCAGGCTACTGGTTTGTTTATTTTTAACATTGTATTGCATCTACATTCTTGTGCTATTCATGATCCCAGGAAGAAGAAAAATC CATTTTTAGGCTTCAGAAATGTTCATTTTGATATCACCTGCTTAGTATAGAACATCTCATTGCTCTTTTTGTTATTTTGGTGGTAAGGTGATTTCTGGTG ATGATGATTTACCTAAAAGAGATGATATTGGAGAAAGACGAAGGAAACATGAGCTTCAGGTGTTGGCTGGTGCTGGAGTCAAGAATGAAGATGATGACGG TGGTGATGATGATAATGAAATGAATGATGTAGGATCTGACGAGGTTTCCGATGAAGAGGATGATGTTGAAAATGAGGACTCAGAAAATGAATTTTACAAA CAAGTGGAACAACAGCGAGCTGAAAAACTGGCTGCAAAAGCTGCTAGTTATTCAAGGAATCCTGCTGCACCCTTCTCTCAGCCGGAGACTGTTGAAGGAA AACGTTATATCTCTACTCAGATGTTGAAGAACAGGGGACTGACTCGAAGTCGCAATAAGGATAAAAAGAATCCGAGAAAGAATTACAAGCTCAAGCACCA AAAAGCTGTTAAGAATCGCAAGGGGCAAGTTCAGAGTATCAGAAAGCCAACGGCTCCTTATGGCGGAGAGTTATCTGGAATTAATACAAATGTCAGTAGA AGCATCAGATTCAAGGGCTGATACTATCATGTGGCCTTTCAATATCACCTTTCTAAATTCCCCAATTTTGAATAATTCTCTTGTAATGGTGGAAATGTAA CTTATTTGATTGTTGATTAGGGAGATACACACATAGCATCATGGATTTTTGCAATTTTGGTTGTTCTGATCTGAAAGATTATGTTACATTTTATGTTATA GAACTTTGAAGTGGTCTGAAGGTAATACAGTCTGAACATCACTGTAACAAATACTTTCAGCTCTTAAGATGTTATGTTTTAGGATGGATAGATTTGTGTG ATACAAGGTGTTGAAATATGGCATGTTTAAGCGTTTATTGTAACAACTTTTAAAATAAGCCTAAAAGATTTAAGTTGCTTTGTAATATTTATTAAAGTAA ATTATAATTAGCTTATACGAACGTGATATGCA
• Tissue: pods
• Gene name: LI_gene_176092;
• Additional information: details;

Expression of Ll_transcript_498561

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.5
• PS2: 0.8
• PS3: 0.4
• PW1: 0.4
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498561

• Blastp: Something about silencing protein 10 from Rattus with 33.07% of identity
• Blastx: Something about silencing protein 10 from Rattus with 33.07% of identity
• Eggnog: UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)(ENOG410XSPX)
• Kegg: Link to kegg annotations (305258)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424250.1)
• Pfam: Sas10/Utp3/C1D family (PF04000.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;