Id Trinity | TRINITY_DN50294_c0_g2_i10 |
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Name Transcript | Ll_transcript_498714 |
Sequence | TTTTATAACGCCACTTCTTCTCTCACATTTCCTCCATTTCTTCTCTTCTCTCACGTTACGCTTTCAATTTCACTTTCTCTCTTTTTCCGGCACGATCTCA GACTCCGGCAACTCCTATCGCCGGCAATTCTTACTCCTCTGTTCTCCGTCTACTTTTCTCCTATTCGATTCTCTTTCTACAATACGCCACCATGAATCCT GAATATGACTATTTGTTCAAGCTTTTGCTTATTGGAGATTCTGGTGTAGGCAAGTCATGTCTCCTTCTGAGGTTTGCTGATGATTCATACCTTGACAGCT ATATTAGTACCATCGGAGTGGACTTCAAAATTCGCACCGTGGAACAGGATGGGAAGACTCTTAAACTTCAAATTGTAAGTCCATGATGGTATTAATGCTT TTTGGAATTAGGATTTTAAGGTTTGACTCACTTGTTTTTGGTTCTGATGGAAATGTTTTCACGATTATGTCACATTGATTTTTTCACCAGTTACATAAAT TGTCTCAATTACTTAAATACACCTTGAAAACACACTCAAACTAAAGTATCTCATTTGTACCCAAGAATGTCTCTATTTTTAATTTGGAAAATGTTCACCT TACACCCCGATATGGAGTGTAAATAGGTGTAGAGAAGAGAGAGAGAAAGTGATAGATGTGATTGGTGGTGTGATATGAATGAAAGAGAGATATAAGAAGG AATTTAAGGTGCAAAAAGTGAGGTAAGAGAAAAAGTTGTAGGAATATATAAGTTACTAATGTTTGATGTAATTACCATATGCTTCATTCACCAAATGTAC CCTTTGTGTTTTTCAAGTATTGTCGCCATGTTGACATATTTTATGCATTTTTAATGTATAGTGGGATACTGCTGGTCAAGAACGTTTTCGTACAATCACT AGCAGCTACTATCGAGGGGCTCATGGCATTATTGTGAGTCATTATATAATTGTCCTCCCCTAGCACGTTCCTTTTTAGATTTTTGGAGATTGGTGTAATC ATGTTGCATTTTATCTTTCTTTTGCAGGTTGTTTATGATGTCACTGACCAAGAGAGCTTCAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGTTATG CAAGTGAAAATGTTAACAAGCTTTTAGTTGGAAACAAGTCTGATCTCTCAGCTAATAAAGTTGTGTCCTATGAGACAGCAAAGGCATTTGCAGATGAAAT TGGAATTCCTTTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAGGCTTTTATGGCCATGGCTGCAGAAATAAAAAACAGGTGCTGTATTCTT ATTTGCATTGTTATTAACTGAGGTGTGAGAGAGTTTAGAGTTTAGTCTTACTTATAAAAACATTCCTATAAACTCCTTATAGCTTATATTGGAGATGCAA GTTATTGCTTTCCCTTTTGCACTTAAGGGTAAAAGTGTCACATGATTTGGCTGAAATCGGTTTCCTCCATTTATAAAATGGAAGACATACCGTAATTTTG TGAAGAAAGGGCATCTTTGTTTTTATGACATAGTGAATTCTGATTTGTTAATGACCAAGAGGTATATATATACCTAGATGATTGACGTTTCTTGATTGTG GTTCTTTTGCACAGAATGGCAAGCCAACCCATGAACAATGCAAGACCTCCAACAGTCCAAATTCGTGGACAGCCAGTGAACCAGAATTCAGGTTGCTGCT CATCTTAGAGACCAAAGTATTTGCGGTCTTAGAAGTCCTTTATATGTGTCTCCCTGGCATGTAAAACTAGTTTCTCAACTTTAATATCAAGATTGTTCAT CATGATTTGCTACTTATCTTCCCGCTCGTTAAAACTTCAATTCTTTTCAATGTATTTCATTTTAAAAGACCATTTGTACAAAATTAGGAATATTGGTGAA TAGTAGTATTTGCCTTGTTCTTTCTCCCATGCCACTTTACTACTTTTCTTTTATGTTTTTGGGAAAAACTAAATACAGTATGTTGTGTTATCTGTCATTA ACTTTTTATAGGGTGTATATATTTCTTTAGGAAAAAAATAACTATAGAGTGACACTTGGAATCTTATACCATTTCCACTCACAAATATAAAAATTAAAAT AAGAGATGCACT BLAST |
Tissue | pods |
Gene name | LI_gene_176098; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498714
Blastp | GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity |
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Blastx | GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity |
Eggnog | member RAS oncogene family(ENOG410XQN5) |
Kegg | Link to kegg annotations (CHLREDRAFT_60490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446050.1) |
Pfam | Ras family (PF00071.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |