Ll_transcript_498702

• Id Trinity: TRINITY_DN50294_c0_g2_i6
• Name Transcript: Ll_transcript_498702
• Sequence: CAACGGGTCATTTTAAAACGTCACTTCCTCTCTCACAATTCTTTCTCCTCTCATCTTCTCTTCTCTCTCGTCACGTTTTCAATTTCTCTTCATTTTTCCA TTTTCTCCGGAACCGATCTCAGATTTCCCTCACTCTTCTCGCCGCCACTCCGCTATTATCCCTCCATTTTAAAACGCTATCATGAATCCCGAGTATGACT ATTTATTCAAGCTTTTGCTTATTGGAGATTCTGGTGTAGGCAAGTCATGTCTCCTTCTGAGGTTTGCTGATGATTCATACCTTGACAGCTATATTAGTAC CATCGGAGTGGACTTCAAAATTCGCACCGTGGAACAGGATGGGAAGACTCTTAAACTTCAAATTGTAAGTCCATGATGGTATTAATGCTTTTTGGAATTA GGATTTTAAGGTTTGACTCACTTGTTTTTGGTTCTGATGGAAATGTTTTCACGATTATGTCACATTGATTTTTTCACCAGTTACATAAATTGTCTCAATT ACTTAAATACACCTTGAAAACACACTCAAACTAAAGTATCTCATTTGTACCCAAGAATGTCTCTATTTTTAATTTGGAAAATGTTCACCTTACACCCCGA TATGGAGTGTAAATAGGTGTAGAGAAGAGAGAGAGAAAGTGATAGATGTGATTGGTGGTGTGATATGAATGAAAGAGAGATATAAGAAGGAATTTAAGGT GCAAAAAGTGAGGTAAGAGAAAAAGTTGTAGGAATATATAAGTTACTAATGTTTGATGTAATTACCATATGCTTCATTCACCAAATGTACCCTTTGTGTT TTTCAAGTATTGTCGCCATGTTGACATATTTTATGCATTTTTAATGTATAGTGGGATACTGCTGGTCAAGAACGTTTTCGTACAATCACTAGCAGCTACT ATCGAGGGGCTCATGGCATTATTGTGAGTCATTATATAATTGTCCTCCCCTAGCACGTTCCTTTTTAGATTTTTGGAGATTGGTGTAATCATGTTGCATT TTATCTTTCTTTTGCAGGTTGTTTATGATGTCACTGACCAAGAGAGCTTCAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGTTATGCAAGTGAAAA TGTTAACAAGCTTTTAGTTGGAAACAAGTCTGATCTCTCAGCTAATAAAGTTGTGTCCTATGAGACAGCAAAGGCATTTGCAGATGAAATTGGAATTCCT TTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAGGCTTTTATGGCCATGGCTGCAGAAATAAAAAACAGGTGCTGTATTCTTATTTGCATTG TTATTAACTGAGGTGTGAGAGAGTTTAGAGTTTAGTCTTACTTATAAAAACATTCCTATAAACTCCTTATAGCTTATATTGGAGATGCAAGTTATTGCTT TCCCTTTTGCACTTAAGGGTAAAAGTGTCACATGATTTGGCTGAAATCGGTTTCCTCCATTTATAAAATGGAAGACATACCGTAATTTTGTGAAGAAAGG GCATCTTTGTTTTTATGACATAGTGAATTCTGATTTGTTAATGACCAAGAGGTATATATATACCTAGATGATTGACGTTTCTTGATTGTGGTTCTTTTGC ACAGAATGGCAAGCCAACCCATGAACAATGCAAGACCTCCAACAGTCCAAATTCGTGGACAGCCAGTGAACCAGAATTCAGGTTGCTGCTCATCTTAGAG ACCAAAGTATTTGCGGTCTTAGAAGTCCTTTATATGTGTCTCCCTGGCATGTAAAACTAGTTTCTCAACTTTAATATCAAGATTGTTCATCATGATTTGC TACTTATCTTCCCGCTCGTTAAAACTTCAATTCTTTTCAATGTATTTCATTTTAAAAGACCATTTGTACAAAATTAGGAATATTGGTGAATAGTAGTATT TGCCTTGTTCTTTCTCCCATGCCACTTTACTACTTTTCTTTTATGTTTTTGGGAAAAACTAAATACAGTATGTTGTGTTATCTGTCATTAACTTTTTATA GGGTGTATATATTTCTTTAGGAAAAAAATAACTATAGAGTGACACTTGGAATCTTATACCATTTCCACTCACAAATATAAAAATTAAAATAAGAGATGCA CT
• Tissue: pods
• Gene name: LI_gene_176098;
• Additional information: details;

Expression of Ll_transcript_498702

FPKM

• PAB: 0.6
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0.4
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498702

• Blastp: GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity
• Blastx: GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity
• Eggnog: member RAS oncogene family(ENOG410XQN5)
• Kegg: Link to kegg annotations (CHLREDRAFT_60490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446050.1)
• Pfam: Ras family (PF00071.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;