| Id Trinity | TRINITY_DN50294_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_498705 |
| Sequence | TTTCCCTCACTCTTCTCGCCGCCACTCCGCTATTATCCCTCCATTTTAAAACGCTATCATGAATCCCGAGTAGTATGTGCCGTTTCCCTCTCCGCAATAC TCAGTATCTCGTTGCGAATCGTTTACTTTGTTTTTTTGTAAATCAATTTTGTGTTGATCTGTTTTAATTATCGTTCGGTGATGTTAAATTTTGTGTTATG TGGAGTGCTGGTTCGATTTTGTTATGAAATTTCTGTCGGTGCTCGTTTCTGATCGCGATTCAGAAAAATATGTTGCTGATTTAGATCTGTTATATTGTTG ATAGATCGATTATTTAGAATTGTTTGTTTTTCTGATCCGGTTTGGGAAATTATTTTTTTGTTTTATTTTGGAATGGTTTTGCTTAATTTTATTTGCAAGG GTGATATAACTGCAGGTTTTATTTTGGGTGTCTAGAAAAATATTTGAACTTTTCTATTAGCTAAACATGTCGGAGTCATAAGGATTTTGTGATTGCTGGG GCTTGCGAATATATGCTAAAATTGATACTTTTAAAGAACGGGAATAATAGTGAATATCTTAATCTAGTTATGTGGGGAGGAACCACATGATTACTGATAT TGTATTCTAGTTAGAAATTGTTTTTGTCTGATTCTTCTGCAAATAGGTTTTTAAGCAATAAATCTGTTTGTAGTTTAGTGTTTGTTGAAGACTTTAAGTT ATATAGATGGGTCTGCAAGTTTGATAGTTGACTGACAAGTGGTTCTCTCTAAGATAATTTGGTTTATAAACTTGTAGCAGTTTTTAATTGCTGAGTTCTC TTTAGGGCAGTGATTAAGGAATCAATAAAAAGTAAGTTCTCGCTTGGAAACTGCAAACTCTGCTTTTTAATTTATACAGGATCGAATACAAGTATACAAC TACTTGCAATAAAATTTTACTTCCTGTGATTCCTTAGCCAATGCCCTGGTTATCATACTCAAATGATAAATGGGAAAGAGTTGTGTTAGGCAAAAGAACA CAACTTTTGTACAAAACTATTCAATATCATATGCTTTTTGTGCTGACAATGGTTGCACAAGTCTGGAGAGACATTTAATAGTGCTGAATGTGTTGTCTGT GCATGGCTAATCATATTTTAATGAATGTCCGATATACGTAAAGACCTATGACCTTTTAGAAATGTCATGTTTACCGTGTACTATGGGCTGTGGCACATGT GCTTGTTTACATTGGCATATTGCTATGTAATGCTCATTCTCTTATAAAATTTATAGACAGTTCCTCATCATTTCTCTCTCTTTGATTGGGCCATCACTGC GTTTATTTTTTGCAGTGACTATTTATTCAAGCTTTTGCTTATTGGAGATTCTGGTGTAGGCAAGTCATGTCTCCTTCTGAGGTTTGCTGATGATTCATAC CTTGACAGCTATATTAGTACCATCGGAGTGGACTTCAAAATTCGCACCGTGGAACAGGATGGGAAGACTCTTAAACTTCAAATTGTAAGTCCATGATGGT ATTAATGCTTTTTGGAATTAGGATTTTAAGGTTTGACTCACTTGTTTTTGGTTCTGATGGAAATGTTTTCACGATTATGTCACATTGATTTTTTCACCAG TTACATAAATTGTCTCAATTACTTAAATACACCTTGAAAACACACTCAAACTAAAGTATCTCATTTGTACCCAAGAATGTCTCTATTTTTAATTTGGAAA ATGTTCACCTTACACCCCGATATGGAGTGTAAATAGGTGTAGAGAAGAGAGAGAGAAAGTGATAGATGTGATTGGTGGTGTGATATGAATGAAAGAGAGA TATAAGAAGGAATTTAAGGTGCAAAAAGTGAGGTAAGAGAAAAAGTTGTAGGAATATATAAGTTACTAATGTTTGATGTAATTACCATATGCTTCATTCA CCAAATGTACCCTTTGTGTTTTTCAAGTATTGTCGCCATGTTGACATATTTTATGCATTTTTAATGTATAGTGGGATACTGCTGGTCAAGAACGTTTTCG TACAATCACTAGCAGCTACTATCGAGGGGCTCATGGCATTATTGTGAGTCATTATATAATTGTCCTCCCCTAGCACGTTCCTTTTTAGATTTTTGGAGAT TGGTGTAATCATGTTGCATTTTATCTTTCTTTTGCAGGTTGTTTATGATGTCACTGACCAAGAGAGCTTCAACAATGTTAAGCAGTGGCTGAATGAAATT GACCGTTATGCAAGTGAAAATGTTAACAAGCTTTTAGTTGGAAACAAGTCTGATCTCTCAGCTAATAAAGTTGTGTCCTATGAGACAGCAAAGGCATTTG CAGATGAAATTGGAATTCCTTTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAGGCTTTTATGGCCATGGCTGCAGAAATAAAAAACAGGTG CTGTATTCTTATTTGCATTGTTATTAACTGAGGTGTGAGAGAGTTTAGAGTTTAGTCTTACTTATAAAAACATTCCTATAAACTCCTTATAGCTTATATT GGAGATGCAAGTTATTGCTTTCCCTTTTGCACTTAAGGGTAAAAGTGTCACATGATTTGGCTGAAATCGGTTTCCTCCATTTATAAAATGGAAGACATAC CGTAATTTTGTGAAGAAAGGGCATCTTTGTTTTTATGACATAGTGAATTCTGATTTGTTAATGACCAAGAGGTATATATATACCTAGATGATTGACGTTT CTTGATTGTGGTTCTTTTGCACAGAATGGCAAGCCAACCCATGAACAATGCAAGACCTCCAACAGTCCAAATTCGTGGACAGCCAGTGAACCAGAATTCA GGTTGCTGCTCATCTTAGAGACCAAAGTATTTGCGGTCTTAGAAGTCCTTTATATGTGTCTCCCTGGCATGTAAAACTAGTTTCTCAACTTTAATATCAA GATTGTTCATCATGATTTGCTACTTATCTTCCCGCTCGTTAAAACTTCAATTCTTTTCAATGTATTTCATTTTAAAAGACCATTTGTACAAAATTAGGAA TATTGGTGAATAGTAGTATTTGCCTTGTTCTTTCTCCCATGCCACTTTACTACTTTTCTTTTATGTTTTTGGGAAAAACTAAATACAGTATGTTGTGTTA TCTGTCATTAACTTTTTATAGGGTGTATATATTTCTTTAGGAAAAAAATAACTATAGAGTGACACTTGGAATCTTATACCATTTCCACTCACAAATATAA AAATTAAAATAAGAGATGCACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_176098; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498705
| Blastp | GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity |
|---|---|
| Blastx | GTP-binding protein YPTC1 from Chlamydomonas with 89.66% of identity |
| Eggnog | member RAS oncogene family(ENOG410XQN5) |
| Kegg | Link to kegg annotations (CHLREDRAFT_60490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446050.1) |
| Pfam | Ras family (PF00071.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |