| Id Trinity | TRINITY_DN50306_c3_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_488523 |
| Sequence | ATTGAAAGTGACCCTAATTAAGCAAAGAGGGACCCTCTGAACCGCGTTAATCTCTCATCTAACGTTTTATATAAATATTTTGTTCTAGTTGTAGAGAGAG AAAATGAAAGACGCAAATTGCATTAAGAAATGGCCAGATCCTAACGCTTCTGATCAATAATCACAGTTATTTTGAGAAGATGAGTGAGGTAGCGAAAATA CTATACATGGTGGTGGTTGATGACGCTGAAAAGGGAAAGGAATCTTTTCGATATACACGTTCCGTTCTTCAGAGCACACTTCAACTTATGGGATGTAAAG CGCGTCATGCTTTCAAGATTAGGCAAAGAGTTTTTGAAATCACGCAGAGTGGGCGTTCTACTGAAGCATTGCAGCCTGAAGGTATGGTTGCGAAAAAGGA CATTCACGATGTTGCCGATCGCATGGGTAAAATAGACTTAGGCAACCATTTAATTTTAGGGAAAGATCTAGGAAATAAGAGTGTGCTATTTGAGTTATAT AAAAGACGCACAACGGTATTTGTTCCAAGAGAAACTTTTCTGGATATTGTTTGTGATGCTCTGGCTGAGTACAAGTATCTGGGTCCCAATCAGAGAGCAG ACTTGGTGCTAGCCTGCAGGATCCGAGAACGGAAGGAATCTGTGACGGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTGTCTGCATTGCT GGGTAGCCGATTGGGAATAACAACAGTGGTATCAACTGATTCTATTAGGCACATGATGAGAAGTTTTGTTAATGAGAAGGAAAATCCTTTGTTATGGGCC TCTACCTACCATGCAGGCGAGTGTTTGGATCCTGTTGCTGTTGCAGATGCAAAGGCCAGAAGGAAAGCAAAAAAACAGGCTGGTGTGTCACATTCACTTC CCAAGGATGAAGTAACTGAGGGTCATAATTATAGGAAATCTGATATACGGACAACAGAGGGTGGATCTGGTACTACTGAACTGCTTAATGCAAAACAAAT GGCTGTAGAAGGATTTAAGGCACAGAGTGAGATGGTGATTGACAGTCTTGATAGGCTAATAACTGCCTGGGAAGAACGAAAAGAGTCTGTTGTTGTTGAG GGTGTTCACTTGAGCCTGAACTTTGTTATGGGGCTTATGAAGAAACATCCTTCAATCATACCATTCATGGTATATATTACAAATGAGGACAAACACACAG AACGATTTGCTGTACGTGCGAAGTATATGACACTAGACCCAACTAAAAACAAATATGTAAAGTATATTCGAAACATAAGAACAATCCAGGATTATCTCTG TAAGCGTGCTGACAAGCATTTAGTTCCTAAAATAAACAATACAAATGTTGATAAAAGTGTAGCAGCCATTCATGCAACAGTTTTCAGCTGTCTTCGTAGG CGTGAAGCTGGAGAAAATTTATATGATCCTATTAGAAACACTGTAACCGTTGTTGATGAGGAATACAGAAATCAATGTGCAGCCAATTCTTTGAGCTCCA AAGGAATGTTTCAATTGATCCAACGACAAGGTTCTTCCAGGCAACTCATGGCTCTCGTTAATACCGATGGATCTGTGGCAAAAGCCTGGCCTGTTAATTC AGTTGACAGTAATGGGAAGCCTATTTGCGGCAATGGAGCAGATAATGGAATTGGAAATCCAATGTATGGACCTTTACGGATTGGCAAGGCAGAACCCGTA AATCTTCAATTTGGTTTGTATGGGATCAGTTCCTGGCCCACTGATGGTGGCACTAGTCATGCTGGAAGTGTGGATGAGTCAAGAGCTGATTATGGGACTG ATACGGGCAGTAGATATTTATCCTCTTGCTGTAGTTCTCCGAGGTTCTCTGATGCACCTGCAAAGGAGGTAAATTTGAATTATATTGTTAATCTCTCTGT TGGGCATGAAAGCCAATGGCTTCTAGATGTCACGTGGGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176202; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_488523
| Blastp | P-loop NTPase domain-containing protein LPA1 homolog 2 from Arabidopsis with 69.32% of identity |
|---|---|
| Blastx | P-loop NTPase domain-containing protein LPA1 homolog 2 from Arabidopsis with 69.32% of identity |
| Eggnog | 2-Phosphoglycerate kinase(COG2074) |
| Kegg | Link to kegg annotations (AT3G45090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436286.1) |
| Pfam | - |
| Rfam | - |
| GO | - |