Ll_transcript_490157

• Id Trinity: TRINITY_DN50327_c1_g2_i2
• Name Transcript: Ll_transcript_490157
• Sequence: CTCTCTCTCTCTCTCTCTCTCTCTTCAAAGCATGAAATGAAATGATGACATAACATCGGTAGAAAGAGAAACAAACAACAAAGAAAAAGAACATCTTCTT TCTTAGAAAGGAGCTTGTCTTCTTGGAATCCTTTCATTCATCGTCGATGTCCATCACCCCCATCTTCCTTTCCCTATTCTCTTCCCTTTCCTTCTAAAAT TTCCCCAAAGAAAAAAGAAGAAAAAAAGGACCAAAAGAGAATTTAGTGGGAAGAAAATTTTGAAAAGGAGGAATACCCAGGTAATTAATTCATCGAAAAA TTCGATTTTGATACCTGGGTGTTTCTCAAAATTTGATTTTTTTCCTTAATTGGTTGAAGGGTTTGGTGATTTGATGGACTTGGACAGCATTGAATGTGTG TCATACTCTGATGGCATGGATGAAGATGAGATCCATCTCCACCATCATCACTCTGAGTTTTCTTCCACAAAGTCTCGTAATGGAAGTACCAATCACAATA TTTCCATGGTTTCCATGGCCATTGCTCCTGCAACCAGTGTCCATGAATTGCTTGAATGCCCTGTTTGTACCAATTCAATGTACCCTCCAATTCATCAGTG CCACAATGGCCACACACTGTGTTCCACTTGTAAAACAAGGGTGCACAACCGATGTCCCACTTGTAGACAAGAGCTTGGAGATATTAGGTGTTTGGCACTG GAGAAAGTAGCTGAGTCACTTGAGTTACCTTGCAAGTTCTACTCCCTTGGATGTCCGGAAATCTTTCCATACTACAGCAAGCTTAAGCATGAGACAGTAT GCAATTTTAGGCCGTACAGTTGTCCTTATGCCGGATCTGACTGTTCTGTTGTTGGGGACATTCCCTTCCTTGTTGCACATTTGAGGGATGATCATAAGGT GGATATGCACACAGGATGCACATTCAACCATCGTTATGTGAAGTCGAATCCCCGTGAAGTAGAGAATGCAACCTGGATGCTCACGGTGTTTCATTGTTTT GGCCAATACTTCTGCCTGCATTTTGAAGCTTTCCAGCTTGGCATGGCCCCTGTTTACATGGCATTCCTCCGTTTCATGGGCGATGAGAATGAGGCTCGGA ACTATAGCTATAGCCTAGAGGTTGGGGGCAATGGCAGGAAACTCATGTGGGAGGGTATGCCACGAAGTGTTCGGGATAGTCACCGTAAAGTCAGGGATAG TCATGACGGTCTCATTATTCAACGAAATATGGCACTATTTTTCTCTGGTGGGGATAAGAAGGAGCTGAAACTCAGAGTTACAGGAAGAATATGGAAAGGA CAACAGAATTCAGATGTTAGGGTGTGCATACCAAATCTTTGTAGCTGAGATGTTCTTTGAAGGACATTTTTATCCTTTGTGTTTGTGACACTCTTGTGAG CTGTATCTGGGCCAACTTTATGCATGTTGTAATAGATTAATGCACTAAGTTGGCTTTGAAATTTTCAGTTTTCTTAAAGCGTGTGATAAACAAGATTTTC TTTCTTCCTTTATAAATTTGTTTGATCAGAATTTGACACTGGAAACTCGGATTCGTCTTTCTTGGTCTGAACTGTGTTATGTTTGCTTCTTCCACTTGCT ATGAATTGTTCAATTACATTGCTTTATAATTCAAATTGTATCAGTTAGAATATCGAAAGAACTACGGTTCATGTATCCTGTATGCTTTACTTGTAGTTAT GCCTGTGGCACTTCTAATATAGGCTGTTTTAAGATTTGTGTTGAAA
• Tissue: pods
• Gene name: LI_gene_176417;
• Additional information: details;

Expression of Ll_transcript_490157

FPKM

• PAB: 10
• PNAB: 6.3
• PS1: 9.3
• PS2: 11.7
• PS3: 13.7
• PW1: 9.9
• PW2: 19.4
• PW3: 28.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_490157

• Blastp: E3 ubiquitin-protein ligase SINAT3 from Arabidopsis with 82.46% of identity
• Blastx: E3 ubiquitin-protein ligase SINAT3 from Arabidopsis with 82.46% of identity
• Eggnog: e3 ubiquitin-protein ligase(ENOG410XVP0)
• Kegg: Link to kegg annotations (AT3G61790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417625.1)
• Pfam: Seven in absentia protein family (PF03145.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;