| Id Trinity | TRINITY_DN50388_c1_g4_i7 |
|---|---|
| Name Transcript | Ll_transcript_489539 |
| Sequence | AATTATTGTCACAAGTTTTGAAAAACAGAAAAAACACGGACATCTATCTCTTCCCTTTCTCCGGCGACTCACAATCTCAATCGCAACCTCCGAGCCACCG CCACCACCACCGTGGAACAGAGTAACCCACAACCCCTTTTCAACATATATACTTCAGTTTCAGAGAAAAGTAGAATGAGCAAAAGACCAACACCTGATCC TGTTGCAGTGTTACGAGGTCATCGCGCTTCTGTCACTGACGTTTCCTTTCACCCCTCTAACCCCATCCTCTTCTCATGTTCTTCTGACGGTGAAGTTCGC ATTTGGGATACCCTCCAACATCGAACGCTTTTTTCTTCATGGTTACATAGTGCTGCTCATGGCATTGTTTCTGTTGCCACCACTCCTTCTCTCCCAACCA ATCAATTTCTCAGCCAGGGTAGGGATGGCACTGTCAAACTTTGGGATTTCAATGATGCTGGTTTGTCAAGGATTCCATTGCTTACAATAGAGACAAACAC TTACCACTTTTGCAAGCTTTCCACAGTCAAGACTCCTTCCGTCTTGTCTAAAAGTGGGAAAGAATCAGAGTTCAGAAGAACGCCTAATGGAGAAATTCCA GAGGATAAGAAAGAAAAGGCTTATGATGATCAACCATGTTTTGAAAGCCGTGAAGACAATATGCATCATGAAGGGCTACCGTATGTGGCTTTATCAGGGG AGAACTCCTCTCAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAGATTTGTGCAGCTCCCTTCAAATATCACCAGCAACTCTTCAAGTGTTTGCAACAA AGACAGAGGGATGTGCATGGCACTTCAACTGTTTTCACCATCTGAATCACGGGGATTTCTAAATGTCTTGGCTGGGTACGAGGATGGTTCCATGCTCTGG TGGGATGTACGGAATCCCAGAGTTCCATTAACTTCTGTCAAGTTCCATTCTGAGCCAGTTCTGAGTATCTGTATTGATGGGTCTTGCAATGGGGGTATCT CGGGAGCAGCAGATGACAAGATTGTTATGTATAGCTTGGAGCATTCTACGGTAACTTCATTTACGTTTTGACTCTTTTCCACTGAAGCAGTGAAAAATCT GCTCATTTGAATTGTAAATTTATTTATCTTTTGTAAATCGTTCTTTACATTGATAAGAATCGGGACATAATAAAGCGGTAATTCTTGTAAATAATTCATT CTGTAGATCTTGCCTCAAGTCAGTGTTCTTGTAATCATCTTTCAGCATTCCAAGTTTATTTCCTTAATTTTATATGATTATATTCATGTACCTGTCCATA CTTCAAGCTTAAGGATCAACTTAGTTGTAGCGTACCAACAAGTCAGTGATTTTTTACTACATATACAGAAAGATAAAAGGATTATGAGAACTATTGCTTG GCAAAACCTAGAACTTGTGACAGGAGCCATTAGTGACCATACTTAAATGAAGCCCTCACATGGATGTTAACTCATTCATATTGACAACAGGTTGCTTTTC ATGTCAAGCATGCTAAACTTGTGTGAATAAACTGGGATCGTAATATATTCGGTAAAAAACAATCATAGATTTTAAGTAATGACAGTTCTTGAATGCTATA TGTACTGCTTTTGCAATGAGTTTGTCTGGCTGAAGATCAGAGCAACTATAAAGCATGGTATGGGAATAGGAAATGATACTTTAAATCACGATTGAATTTC CGGATTATCTTCCATGAAAAAATTTCTTATGATGGTTTTTCAGTTTGCAGCTTAATACTTGTTACACCATTTTTTTGTTTTGCATACTTATATTTTCTTT GTATCATTTTGAGTTAAGGGTACATGTGTTTTCAAGAAAGAAATCAGTTTGGAACGACCGGGCATCTCAGGTAGCTCAATCCGACCCGATGGAAAAATTG CAGCTACTGCTGGCTGGGACCACAGAATAAGGATATATAATTATCGCAAAGGAAATGCTTTAGCAATATTGAAGTATCACCGTGCCACGTGCAATGCTGT AACTTATTCACCAGATTGTAAGCTTATGGCATCAGCTTCTGAAGACACAAATGTGGGGCTATGGGATTTGTATCCTCCTCAATTATGAAAATTAATTTTA TGAATTTATTCAATGTACGTAATTACCACATAAATGTATGAATTTATTCAACCTCTTCAAATTAAATAATTTGTGGTTCTTACATTTATGTGGTAACTGT TTTATTCAACTAGAAATTGATATTAGAGTCGCTTATGACATTAGCATAATTCTATGCATCGGATTTTAGAGTAATTGATGAGTTAAGAGTTCAATTTTAA TGTAATATTATTACATTTTTTAATATGTATATACTGAGTGTAAAATATTTTTATAATATTAGTAAATCATAATATGCTTGATTCCCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176845; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489539
| Blastp | Protein DECREASED SIZE EXCLUSION LIMIT 1 from Nicotiana with 59.32% of identity |
|---|---|
| Blastx | Protein DECREASED SIZE EXCLUSION LIMIT 1 from Nicotiana with 59.18% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001698) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416003.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |