Ll_transcript_345552

• Id Trinity: TRINITY_DN50404_c0_g3_i1
• Name Transcript: Ll_transcript_345552
• Sequence: CTAAAGGCCAAATAAACCAAAGAAAAGAGAGGTGGTATAGCTGGCAGCTTGTCCCAAAAATCCTTAACCTATCATTCCTATGATTGACAGTTTACAATTT TACATATTTCATGTTTCATACCTTAGTCATAATATTTCTTCTATCTTTACTTCCATCATCTTAATTGGTGAAGAAACTAATCATTTTCTTTGATTAAATC AATCAATCATGTAACAATTCTAGTTTTCATAATTAGTCTTTCAAAGAAAATATGATTTGCCACTCAAGAGGAAAGTGAAATGCCATCCATTGTGTTTGTT CTGTCTCCTTAAAAAATGGATTCATTTCTTCATCTATTCATAAACTTATTCATTATACTTCATTTTTACAAATTAATTTGACTATTAAGATCGTAGTACT TTTGCAGGTAATAGAAGATTCTATAGTACTTCTTGTTTTCAAAGCTTGTTATCAGCTTGATTTCTCTATATACCTTTCATGTAGTATATGCCCCTTGTTT GCCATTAGAATTTCTTGGTGTTTATTGCATAGGCATTCTGTTGGAAGACCTGCCCCATCAGCATCTCTTGATCTAAAGCCTTCAGCTTTTGATCCCAAGG AGAAAGTTTGGACAAGATTTCCTCCCGACGGATCGAAATATACTCCACCACATCCGTCGTGTGAGTTCAAGTGGAAGGACTATTGCCCGGTAGTTTTCAG GACCCTTCGGAAGCTATTTAAAGTCGATGCAGCCGATTACATGTTATCCATATGTGGAAATGATGCCCTTCGCGAACTTTCCTCTCCTGGCAAAAGTGGC AGCTTCTTTTACTTGACAAATGATGATCGTTACATGATTAAGACAATGAAGAAAGCTGAAGCAAAAGCTCTTTTGAGAATGCTTCCAGCTTATTACAATC ATTTCCGAGCATTCGAAAATTCTCTACTTACAAAGTTTTATGGTCTACATTGTGTAAAGTTAACTGGAACTGCTCAGAAGAAGGTTCGCTTTATCATAAT GGGCAATCTCTTCTGTTCTGAGTATACCATTCATAGACGTTTCGATTTGAAGGGTTCGTCACTTGGTCGCATAACAGATAAGCCTGAGTCTGATATTAGT GAAACGACTATCCTTAAAGATCTTGACCTAAACTTTATATTTCAACTGCAAAGGACTTGGTTCCAAGAGTTTCGCAGGCAAATTGATAGGGATTGTGAGC TTCTAGAGCAGGAGGGAATCATGGACTATAGTTTGTTGGTTGGTATTCATTTCAGAGATATATCAACAGATGGGGATCTTATTCCTTCAGGATCTCAAAC TCCTGGTGGCGATAGCGAAGCAACACTTTGTATTTCAAGAGCAGATGTGGATCAACTTCTTCTAGACCCTTCCAGGTGGGCTAATATCAAATTGGGTTTG AATATGCCAGCAAAGGTCGAAAGGACAGTGAGACGAAGCGATTGTGAATTACAACTTGTTGGAGAACCAATTGGAGAGTTCTATGAGGTTGTATTGTTTT TTGGTATCATAGACATACTTCAAGACTATGACATCAGCAAGAAGCTTGAACATGCCTATAAATCCATTCAATATGACCCAACCTCAATATCAGCTGTTGA CCCTAGACAATACTCGAAACGTTTTCGTGACTTCATATTCAGAGTATTTTCTGAAGATTCTTGAAAGGATTACATGCATGATTCTGTATTTCTTATGTGC ATTCTTATAATCAAGAGGCGAATAGGGTATCTGGTTGCTTCAAACGCAAGTAACACCCCTATTACCCTTCTTTGGTACCCTTTGAAATCTTCAACTTCAA GTAACTGACTTTGGGTACCATTTCAATTCTTTCAATTTTATTTTCATCTAAATTACCTTCATTATGTGTATAGTATACATGAAAACAACACATGATGCAG AATGTTGAAAGCAAGACCAACTCTATGCATGATGCATGCATGCATCTTTTACTCCTTTGCAAGAATATGGTGTCTTTTCTCCCAAATATGGAGAAAAGGT GATAATGAGTTTCAACATTTTGTATCATTATGAGATGTATATTTATAGAGAAATGTTAGATCAATGTACATGTTCAATTTTTTATTTCTTTAATCCTCAT TGATGCTATTAGCTTTTGGGTTG
• Tissue: pods
• Gene name: LI_gene_176960;
• Additional information: details;

Expression of Ll_transcript_345552

FPKM

• PAB: 2.1
• PNAB: 2.1
• PS1: 0.3
• PS2: 0.3
• PS3: 0.6
• PW1: 1.7
• PW2: 6
• PW3: 4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345552

• Blastp: Phosphatidylinositol 4-phosphate 5-kinase 4 from Arabidopsis with 79.94% of identity
• Blastx: Phosphatidylinositol 4-phosphate 5-kinase 4 from Arabidopsis with 80.21% of identity
• Eggnog: whole genome shotgun sequence(COG4642)
• Kegg: Link to kegg annotations (AT3G56960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429714.1)
• Pfam: Phosphatidylinositol-4-phosphate 5-Kinase (PF01504.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;