| Id Trinity | TRINITY_DN50420_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_346457 |
| Sequence | GGAAGGCTTTCCAAAATCATCATTTCCCTTCCCTTCCTCTCCAAAACCACACTCCCAAATAAAGCTTAATGATGATGATGATAATAATATAATAAAAAAA AGGGCAACCTAGTGCATGAGACCTCCACAGGTCATAAGGCAAACAACCTTACCGTTATGCCGTGGCCCAATCTCTTAATAATAATAACATGTTGATTTTG GGAGATGGCCTTCTGTTAATGATATTCTATGTGGGTGTAACAGCATTGCAGAATGTTCAGTGGTTAACTCAGTGATTAAGCCAACATATATGCTGACATA TGAGAGTGCATCTGAACTACTCCATTTGAACCTTGAGGAGGAGGTCGAACTCAAAATTTTGTCCGAGGCTGCAAACCTTCGTTTAAATTGGCGCCGTCAA CAGGGTGCTGTTGACACAGCAACATTAGAAACTCGTGTTAAAGTGTCTAATCCAGAGAGTCCAGAGCCATCAATAAATATTTATGTCGAAAACCAGGCAG ACCCTGCAATGCGACTCGTCTCTGAGATGATGGTATTGTGTGGTGAAGCCATTGCCACATTTGGGTCCCGGAATGACATTCCTTTACCCTACAGGGGACA GCCCCAATCAGATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTCAGGAGCTTTGCTCTGATCAAATTAATGCGTGCTGCAGAAATCGAT TTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGCAGATATTTGGATCTTCTTGCTCATTATCAGA TAAAGGCATTCCTTAGAGGGGAGCACCCACCCTTTTCATCTGGTAAGCTTGAAGGGATTGGAGCAGTTGTAAATGAGAAATTTAGAGCAGTGAGGAAGCT CTGCAGCAGTAGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177097; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346457
| Blastp | Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 75.48% of identity |
|---|---|
| Blastx | Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 72.65% of identity |
| Eggnog | 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557) |
| Kegg | Link to kegg annotations (AT5G02250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448560.1) |
| Pfam | RNB domain (PF00773.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |