| Id Trinity | TRINITY_DN50422_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_346252 |
| Sequence | GTACACGTCTCTGTTACTCTAGAACTCTATTTTTTATATTTAAAGGGTGATATGTGGAACCAAAAGTTTCATATACAACCCCTTAGACCTTAGTTATCTA GTTATCTATATGAAGGTTCATGCAGCATCATGTGTCAGTCTTAGCACTTGCCTTGGCCTGTAAACATTCAAATACATAAGCTACTTTTTTCTGTTCTATT AGACTAAGATGTTACAAAAAAGAGACATTGTTCAATCCTCTTATAGAATATAACTGAAAATTTGAGGCCAGAAGTTATATTAAGAAGCAAACAGAAGAAG GGAAAAGTCACAAGAAATTCAAAGGAAGATGGGTTTTTTGAATCTACTGGAGGTGGCTTCTATGCCAATTATTCAAGTCCTACTTATAAGTGCATTGGGA GCTTTCATGTCAACTCGTTATTTTGATCATCTTCTTTCACCAGATTTTCGGAAATCCTTGAACAAGGTTGTTTTCATTACATTCACTCCTTCACTTGTAT TTGCCAGTTTTGCAAAGTCTGTTTCACTTGATGATATGATATCATGGTGGTTTATGCCAGTTAATGTTGGACTTACCTTCTTAATTGGAGGGATTCTAGG ATGGATACTAGTAAAATTACTAAAGCCTAACTTGAAGTTGGAAGGCCTTATAATTGCATCATGTTCAGCAGGAAATATGGGTAACCTTCCTATAGTAATT GTCCCAGCTATCTGTGATGAGAAAGGAGGCCCATTTGGTAGAAGTGATGTTTGCCATAGCAATGCACTCTCTTATGCATCCTTCTCTATGGCGCTTGGAG GCATTTTCATCTGGACTCATACTTACCAGACAATAAAAAGTAAATCTTTGCGATATAAGGCACTTGAGGCTGCTGAGATTGTAAAGATTCCCAACAAAGA TCTTGATGCTAATGCAGATACTCTCCTTCTCAGGGAAGAAGACGATGAAAACACAGTATTAGAAGTCCCCACGTCAGATTATATTGGAGACACTGAAAAC CAAAGTATTGAAGAACAAGATCAGTCCAGTGTATCGAAGAACGGGAAAGAATCCTCTTGGTATAGAGCGATAGAAGTTCTGAGAAATTTTGTGGCAGAAC TACTTTCACCCCCAGCAATTGCTACTTTTTTCGGCTTCTTGTTTGGTACGGTTTCATGGCTAAGGAACCTAATAGTAGGAGAGGATGCTCCATTCGCAGT TATCCAAGACACTCTTGTATTACTAGGGTATGTGACTTTGCTCAAAGAATCTAACTTTTCTCCTTTTTTCTATTTCTTTTCTAACTATTAGCTCATGATA TCATGATGTAATACTAACCTCACAGCTATCTGATTATTGAACTTATTGCTTTTTTTGCAGGAATGGGACAATTCCTTGCATCACCCTTTTACTTGGTGGT AACCTTGCTCAAGGTATAGCTGCCGAAGATATCTTCAACATAGTTTACAATTTCAGGACTGAACCACTAGTTTTGTTAACCTTGTCTTCAAATTGCAGGA TTGAAATCATCAAGTGTCAAACCATTGACCCTCATCAGCATCACCATAACTAGACTTTTCATACTACCTGTTATTGGATTATTCATTGTTAAAGCTGCAG CAAAATTAGGCTTCCTCCCATTGGATCCTTTGTTTCAGTATGTGCTGGTGATGCAGTATGCCATGCCACCAGCAATGAATATTAGTATCATGACTCAGCT GTTTGATGTAGGTACTGAGGAGTGTTCAGTTATCCTGTTGTGGACATATGTTTCTGCAGCCATAACATTGACTGCTTGGTCAACATTCCTCATATCAGTC TTATGATCTTATAATAAGGTGTCTTTAGCTCCTTATTTTTATGCATAAGAATATTGTCCAATCAAGATCACAGTCTATACAGAACCATGGATAGTGGTTG TGTGACTGAGAACATTTATACAGTAGATTTCTTTCAACAACTTTGTTTCACTCTATAGGTTACATAAAGATAAAAGAATGGCTACTTAAGATTTTTTAGT TATTTTTTTGTATTGCTTGCCCTGTATTAGTCTTTTTTTATTGTATAGGGAAAATTAGAATTAGGTATTGAAAGCTATTGTGATTTGTATGTGATCCTCA CTTGGAAAAAAACAAATGGTTCACATTTTTTATTCGTTATTTTGTTCTTTTTGATTATTTCTATATACTTCTTTTTTCAGTTCAATTCTTTCTACACTTT GAAGATGCAAATATCATAAAATTTGCATGTTTACTACTAATTTGAAAGTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177118; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346252
| Blastp | Protein PIN-LIKES 7 from Arabidopsis with 53.29% of identity |
|---|---|
| Blastx | Protein PIN-LIKES 7 from Arabidopsis with 53.29% of identity |
| Eggnog | Auxin Efflux Carrier(COG0679) |
| Kegg | Link to kegg annotations (AT5G65980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422406.1) |
| Pfam | Membrane transport protein (PF03547.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |