| Id Trinity | TRINITY_DN50424_c2_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_344273 |
| Sequence | CTTATATTACCCATTTTTGCTATGGTATTTTATTTATTGAATTTTGTTGCTTTACCTTGTGTGTGTGTTTGGTTCACCATATTAGTTTCTTCGATTGGTT GATCCAGCATGTTGAACTCGATCTTTCCATTTAATGGCTGATGAAGAAAGATCCTATTCACACTCAACTCTAGAAACAAAAGGACTAACCTTGGTGTGTG ATTTATGAGTAAAATTGTGTTGTTGAATTGAAGTTGTGAACTTTTGAGGGGTTTTGTTATGTTATGAAAAGTTTTCATTGATTTGATTTGGAATTTCTGA AATGGGTCGTTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGGCAAAAAGAATGGGGTGAAAGAAGTAGTTGCCAAAAAGGAATCTTTCAAAGATGCT TCAATTCCTCAATCTCAATACCCCACTAGGGTTAGCTCAGATAAATCAAAATCACAAAGTGGCTCAGATCCTAAGAAGGAAATACCAGTTGCAAAGAATG GACCAACAGCCCATATTGCTGCACAAACATTCACATTCCGTGAGCTTGCCGTTGCTACCAAGAATTTTAGGCCAGAGTGTTTATTAGGCGAAGGAGGTTT TGGACGTGTATACAAAGGTCGACTTGAGAACACAGGACAAGTAGTTGCTGTAAAACAGCTCGACCGAAATGGCCTTCAAGGAAATCGAGAATTTTTGGTG GAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTGAAGTTAATCGGTTATTGCGCAGATGGTGACCAGCGGCTTCTTGTCTACGAATTTATGC CATTGGGGTCTCTGGAGGATCGTTTACATGAAAAATATGTGCCGGTTTTCGTTTTCATCTAGCTTTATACCTTCATGGGATGAGCAGGTTAGCAGAACAT GATTTTTAGCATGCTTTTGGTGTAGGACAGTTTCCTGCTATATACAGATAACCTGTTTGTTTCTTATCATTAAAAGCTTTTAAAACAGATGGTTATTGAG GTTGCTGAAAGGACATAGTAAGGTGGCCTACCATACTAGTCCGAAACTTGTTAGCAAACATAGACTGAATTATATCTGCATACTTGAAAGTCAGAGAATA AGTGAGAAAAGGTTAGTGGGAGTACATGGCCGATAAAGTACCCTGGGTATCTTGTTCTGAGGTCATTGCTGAATTTTCTGTAGTAAATTCATCTCACCGT TATGGATGACGTGATACTTCATCTCTTCTGCCATTGTAAACACATGTAATATCTCTGCTCACTGTGTCTGCCATTTTCATTCTCCATAACACCAGCAGTT GCTACCATACTTAAAAACTCATCATTATAGTAATTAGTAAGTATTACTATTAGGCCATGCTAGGAGACTTGGTGTTACATCTACATAGTTACAGCCTAAT CACTGAGCTTTCTTTTCCCTAATAAACTATGATAATCTCTGCTTTCTGTGTTGCTTAGGCCTTTCTTTTCACATCACCGATTTAAGTCGAGAAATTTCTT ACTCTTGGCTCTTGGGTCTCTTTCCAGATCTTCCACCTGAAAGGGAACCCCTGGACTGGAACACTAGGATGAAAATAGCAGCCGGTGCAGCAAGGGGGTT GGAATATTTGCATGACAAGGCAAACCCCCCTGTGATATATAGAGACTTGAAATCATCGAACATCCTCCTAGATGAGGGTTATTATCCAAAGTTATCTGAT TTTGGGCTGGCAAAGCTTGGTCCAGTTGGTGACAAGACTCATGTATCCACACGAGTAATGGGAACATACGGTTATTGTGCCCCAGAGTATGCTATGACTG GTCAATTAACTCTGAAGTCTGATGTCTACAGTTTCGGAGTTGTGTTTCTTGAACTTATTACAGGACGCAAGGCTATTGATAATGCACGTTCACATGGAGA GCATAATCTTGTTGCATGGGCACGACCTCTCTTTAAAGATCGTAGGAAGTTCCCCAAAATGGCTGACCCACTACTTCAAGGCCATTATCCAATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177132; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344273
| Blastp | Serine/threonine-protein kinase PBL27 from Arabidopsis with 75.14% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase PBL27 from Arabidopsis with 91.67% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT5G18610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020989866.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |