| Id Trinity | TRINITY_DN50438_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_345359 |
| Sequence | AGCATACATAATGCATGTTTTGCAGTGTGAGGAAACTAAAACCACTCCAAAACCATTCTTCTCTCTTTCCCATTTCTTCATTCTTCACTATAAATACTTT CAATCATTCCTTCTTTTCAATTTCAACCTAACTTTCTCTCTTCTCTCTTCTCTCTTTCTCACAACCCCTTTTTCTCAAGGATATTAGATGCTCTGATTTT TCTAATGGAGACAAAAACAGAAAAACATCGCGCTATTGCGGCAAAAAAACCAACCCTTACACCTAAGGCAATAATACACCAAAGTTTCGGCAGTAAGGCC TCCTACACTGTAGAGGAAGTGAAGGAGTCTCGTCAAACTGAATGTCTGGGATTAAGTATTCAACAGAAGGGACCATGCCTTTATCGCTGCACGTTGCAGC TTCCAGAACTCTCCGTTGTATCAGGGACCTTTAGCAAAAAGAAGGATGCAGAGCAATCTGCAGCAGAGATGGCTATAGAGAAGCTTGGCATCCGTCCTAT GATCGATGATCCTACTCCACAGGAAGCATGGGGAAATTTAGTTGCTCGAATTTCCTACATATTTTCAGAAAATTTTCTTTCTTCTCTTCATCCTCTCAGT GGTCACATTGGAGCAGCTTTGTGGCGAAAAGGTGATCGCTGTGGATCAATTCCTATTTCTATTGTTGCCGTCTATGATGCTAAGATTTCTAGTTTGTGCA AATGTATTAATCCTGAAGTGGAGTCAAATCCATTTTTGGTTATTTCATTCATAATGAGGGCAACTACAGAGTTATCTGGGTCTCTTGTTACATCTGAACA GCATCTCTGGATTAGAAATCAGAATCCATACTCGCAAGATATTGTAGAATCATTAATGAAACAAGATTATTCACAAGAATGCATTCAGGTTGCTGCCGTA CGTATCCCTAGTTCAGTGGAAAAGCCTGTTGAAGCAGTGACTCTTCGTATTTCTTCAAAAGAGTACTACCTTGATATCATTGCTAATGATCTTGGTTTTG AAGATGCTGCAAATGTTCTGATTTCAAGGAATTTGGGTAGAGCTTCTTCTGAGACAAGACTGTTCTTTGCTGCTCCAAAATCATATATACTGGACCAGTC TTCTAAATTGCCAAATGGAAAAGAAACCTACCATTCCGACGGATCTTTGAATGTTAGGGCAAGTTACTTGTCTGGGCAAGACATAATTGGTGATGCTATA TTAGCATCGATCGGATATACATGGAAATCTAGAGATCTCTTCTACGAGGATGTAACAGTTCGGTCATATTACAGGATGCTTATAGGGAAGACCCCAGGTG GAATTTATAAATTATCGAGAGAGGCTATGCTCACAGCTGAGTTGCCTTCAAGATTCACCACTAGAGCTAACTGGCGGGGTTCCCTCCCAAGGGACATACT TTGTATGTTTTGCCGTCAGCATCATCTGTCTGAACCTGTCTTCTCCATTCATCCTTCCAAAGCAGTATCCGAATCTGAGATGTTTAAGTGTGAACTAAAA TTACTTTCTAGGCATGAGGATTTGATAATCAAGTGTTTCCCAGAGGATTCATTTAAGAAGCAGAACAATGCAATTCAGAATGCTTCGTTGATACTTCTAT CATGGTTGAACAAGTATTTTAAGAATATACTTGTTCCTTTTGAGAAGCTTGACGAGACCGTAGACTTTGATATCCAGATTTATTCGAGAAATATTTTCAA AGGGATTTCAGCATGTCAATCGCTTCACAATGGTCAGCTAAATGCAATTGAATTGCATAAAATACTTGAATCAATTTGTGCGAATTCATCATATATCATA TCAGGAAATGGAGTATGCTCATTAAAGATCGACGGTCCAGATTCTGGTGTCTGTCCATGCAATGGATCTTTAGCTTGTATAAGTTATTCAGTTTCTTTGA TTGTGGAGGGTGAGAATATAAAAGAAATGATTGAAGTTTGTAACGATTTTGAGTTTGAGGTGGGAGTTGGTGCCGTGATTTCCTATGTTGAAGAGGTTGT GATGCAGATGTCTGTTGGCCAGTCTGCTTATTTCACTACAAATTCGCTCCCCGATTTTATTTTTGCTTCAGCAAGTGATTCTGCCAAAATAATGTCCTTG TTATCATCTAAAACATGTAGCATGGAGTATGAAATAAGTTTGACCAAGGTAGCAGAACCTCTGGAGGATAGAATGGAGCAAGCTCTTTTCAGCCCTTCAC TTTCAAAACAGCGGGTTGAATTTGCAGTGCAACGTATACTAGAATCCCATGCCACTACTTTGCTTGATTTTGGATGTGGATCTGGAAGCTTGTTGGAAGC ATTGCTAAATTATTCAACTTCTCTGGAGAAAATTGCTGGTGTTGATATTTCACAGAAGGGTCTTATCCGTGCTGCTAAGGTACTCAACTCAAAGTTAGTC ACAAATTCAGATGCTGTTATGCTACCAACAAGTGTCAAATCAGTAATTCTTTATGAAGGTTCAATTACAAAATTTGGTTCCAAGTTACATGGATTTGATA TTGGCACTTGTTTAGAGGTGATTGAACATATGGATGAAGATCAAGCTTGTCTATTCGGCGATGTGGCATTAAGCTATTTTTGTCCACAGATTCTCATTGT TTCTACTCCAAATTTTGAATACAATGTGGTGCTCCAGAAGTCCAGTATGACGAACCAAGAACAGGAGGATGAATCGGACGAGAAAAGCCTGTTACAATCA TGCAAGTTCCGCAACCATGACCATAAATTTGAATGGACCAGAGAGCAGTTCCAACAATGGGCATCCGACATCGCTGCAAGGCACAATTACAAAGTGAAGT T BLAST |
| Tissue | pods |
| Gene name | LI_gene_177218; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345359
| Blastp | Small RNA 2'-O-methyltransferase from Arabidopsis with 49.44% of identity |
|---|---|
| Blastx | Small RNA 2'-O-methyltransferase from Arabidopsis with 49.44% of identity |
| Eggnog | Methyltransferase(ENOG410XSD6) |
| Kegg | Link to kegg annotations (AT4G20910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458770.1) |
| Pfam | Methyltransferase domain (PF13847.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |