Ll_transcript_346357

• Id Trinity: TRINITY_DN50445_c2_g1_i9
• Name Transcript: Ll_transcript_346357
• Sequence: GTTGCATGGTCCTATGTAATACCTGAATACCAACGGATGTTGGTTCAAGTGGTACATGCTTGATTCCTCTTAAGCAAGGTCTCGGATTCGAGTCTTGTCG ATGGAGAAAATGTCCGTTGGGAGAGTTAGCCCCACATACCTGTTGATGTCCCCGGCTCAGACAAGATTGCCTCAAGTGCGAGAATACCTGATGGGGACAG GCCGGAAAACACAAACTTCTCATTCCAGTGGAACTCAGCCTTTCACTCCTAATTCGGTCGGAAGTTCTGTATGTGGGAGAAATTTGAGGAAAAATCAACT TGGTGGCGTCATATTTGGGACCAATAACACTACAATTAAAGAATGTCTATCTAAACAACTCTTTGGCTTACCGGCTCAGCACTTCTCTTATGTGAAGAAT ATTGATCCTGGGTTGCCTCTGTTTCTATTCAACTATAGTGACCGAAAGCTTCATGGAATTTTCGAGGCGGCTAGTAGTGGGAAAATGTTTATAGACCCCT ATGGGTGGACTGAGGGTGGTTCAGCGAGAACACAATATCCGGCACAGGTGCAAATTCATGTGCGGCTTGAGTGCCAGCCACTGTCGGAAGATAAATTTAG AGGCATAATTCAAGACAACTACTACACTCAGAAACATTTCTGGTTTGAGCTAGACCATGCACAAACAAATAAGCTGATTGCTTTACTAGCATCCTTAGCA ATAGTCCCTAGTAATTCTGACCCTCGGAATATACCGAAGTGGACAACCTTGTCTCGGTATCTTCCATTACATGAAACTCTGAGGCATGGTGAAGTATCTA AGACGGTTGAATCAGAGATACAGCAATCTGCTCACTCAAGTATGAGATCAGATTCAACTGAAAATGTTTCTTCTTTAGATGGAGACATCCCGACATTGGA TACTCATGTAACTTTGAATGAAGTAAAACAGGATGACAAGGACCTCATATTTACGAAACTAAAGGAATTGGCTCTTCATCTTGAAACTCAAAAACCATCT TTACCTGACAATGTAACTGATATTCCGGATTCGATCAATGTGTGCTCTGTGGAAAAGGGTAATTTGGAGGCACAAGCTGGTTTAGAGAAGAAGGAAGAGA ATCTTAGTACCCCATCTGAGTATCAATACAACATAAGCCAGTTGGTGCAAGAGGTCAAAGAACTGATGGCATTCAAGAAAATACAAACCGAGAGGAATAA TTACCTGGACCAAAAGCTGATGGAGGCAGGAATGGAAATTCAGTATCTAAAAGATCGTTGTACACGGTTAGAATCTGCATGTTATACTCCTGTGTCACAT GCCGAGAAAACATTGATCAAGTCATCTGCTGAGCTGCATTTAGACCCCAAAGATTCATTATTTTTAATAGGAGGCTTTAATGGAGAATCATGGTTCAGAA CTATGGATATGTATTCTACTTCCCAGAAGGCAATCAAATCTCTCAAGCCGATGAGCTCAGTTCGATCATATACTTCAGCTGTGCAGCTGAACGGTGAGAT TTATGTTTTTGGTGGTGGAAATGGGCATGTTTGGTATGAGACAGTCGAGTCGTACAATCCAATTGATAACAATTGGACCTTGTGGCCTTCTTTGAACCAG AAGAAGGGAAGCTTGTCCGGAGCTGCTCTGGATGGTAAAATATACGCCGTTGGTGGTGGCAATGGTATTGAATGCTTTTCAGATGTTGAGATGTTTGACT TAGACATCGGACGGTGGATCCCTACGCGTTCGATGCTTGACAAGAGATTTGCTCTGGCTGCAGTGGAACTCAACGGTGCGCTTTATGCAACTGGTGGATA TGATGGAAATGATTACCTGAACTCTGCTGAAAGGTTTGATCCGAGGGAACATTCTTGGACTAAAATTCCGAACATGAACACAAAGCGGGGCTGTCACTCA TTAGTTGTTCTAAATGAAAAATTGTATGCTCTAGGTGGCTTTGATGGAAGTGGAATGGTTTCGAGTGTTGAAGTGTTCGATCCTCGTCTCGACGCGTGGA CGATGGGGGAACCGATGAATCATGCAAGAGGGTATTCTGCTGCTGCAGTTGTCAAGGACTCCATTTATGTAATTGGAGGAGTTAAAGTTGGTGAGACCAT TGTAGATACAGTTGAAAAATATAAGGAAGGTGAGGGATGGCATGAAACTTTCACTACAGCAGCTGTCAAAAGATGTTTCTTATCGGCTATCGCCTGCGAG TGACATATGGTTACGACAACAACAACCAAGCCTTAGCCGAACTCGATCTTATTTCGGAACTTGTTCTTATGGTTGTTATGAGACAAATGGTAGAGGCTCA CCATTTGAGTTTTGAGCATAGTTTCATATGTAATAGGAAAGTATAAATATCATTAAATTATAAATAATTGTATATAGTTTAGGCAAATTGTGGTTTATTA ATGAAATTAAATTAGTTGTTATTTTCATTTTCACTTAGATTATTTGAGTAATTAAGAGTATTTTGATATCAAATTCATTAATCAAAAA
• Tissue: pods
• Gene name: LI_gene_177258;
• Additional information: details;

Expression of Ll_transcript_346357

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 2.8
• PS2: 0.6
• PS3: 0.8
• PW1: 1.1
• PW2: 0.8
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346357

• Blastp: Influenza virus NS1A-binding protein homolog A from Danio with 34.62% of identity
• Blastx: Influenza virus NS1A-binding protein homolog A from Danio with 34.62% of identity
• Eggnog: kelch-like(ENOG410XNX8)
• Kegg: Link to kegg annotations (387591)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450371.1)
• Pfam: Nucleoporin FG repeat region (PF13634.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;