| Id Trinity | TRINITY_DN50449_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_344800 |
| Sequence | ATTCGGTTGGTAAGCTATTTCAGGATTTTATGTGTATTATGTCTAGATATTGAATGATGAAATGAAGACCAGTGAAAAATGGTAAAAAAATATAACTGTC TCAAACTAAGCAAAGATGTGGCAGAGACAAAGGCATTGATTGAGAAAAAAAGAGGTCCCTCTTTGTAGGAGACCAATGAGGAATGACAGCAAATGGTTCT TCTTGTATTATGGATTTTTTTATCAAGCAACATTTTTTCCTTTTCTTTCTGTTGAGAACCCCTGCTATTCCTCCAAACAGGGGTCCAACTGTTGATAGAA GAGCAGGTAGGAGAAAGGTGGTGTTTCCGGCCGCGTATTCTGCCATAACCTTTTGGCCGGAACCCAGAATAGCTCTAAGCTCTTCTATTTTGAGAAACAG GAATAACAATAGTCAATAATGTCTTCTCCTCATAACTCATCACCTGATGATGCTACACCTGATAACAGTACCCCAGATGATGCTGACAACTCATCATCGC CATCAGAACCACCACCATCAACGCCATCAGAATCATCACCACCTCCACCACCACCAGAAAATTCCTCACCCCCTCCAACACCACCCTCATCCAATAATTC TCCCCCGCCACCATCATCATCGAACAATCCACCACCATCATCGAACAGTCCACCCCCACCACCATCATCAAACAATCCAACCCCGCCATCATCCAATAAT GGATCTCCACCTCCTCCAGCATCATCAGGCCGTTCTCCACCCTCACCTTCTAGTGGATCACCATCACCACCACAACACAAATCATTGCCAAGTAATGATA ATGATAATAACAACAAAACACCATCCCCTCCGAAATCGGATAGTGATAGTGACAATAGCGACAAGGCAATTGTTGGGGCAGTTCTTGGTGTAGGAGCTGT TCTTCTGATTCTGGCTATCGTTTGTGTTATTTGCTCCAGGAGGAAGAAGAAAAGAAAACAAATGTACTATTATGGGGAACAAGATGCAAAAGGGAATAAT CACTATTACAATAATAGTGGTCAGCACCCAGTTGGTTATTATGGAGGTCCACGCCATCCGGACCATGTTGTTGGGGTCCAAAGTGGAATGGCTCCTCCTC CCAATAGTGGTTGGGGTGCACCACCTCCACTAATGATGAACAGTGCTGAAATGAGCTCCGGTTTCTCAACAGGACCACCTCCTCTGCCTCCTCCTTCACC AAACCTTGCACTAGGCCTCAAGGGTACATTCTCTTATGAAGAATTAGCTGCTGCTACCAATGCATTTAATGATCAGAATTTAATAGGGCAAGGGGGCTTC GGTTATGTCCACAAAGGAGTGTTGCCTAACGGAAAGGAGATTGCGGTTAAGAGCTTGAAACAAGGTAGTGGGCAAGGAGAGCGAGAGTTCCAAGCTGAGA TTGACATCATTAGCCGTGTTCATCATCGTCATCTTGTGTCACTTGTTGGATACTGCATTGCTGGTGGACAAAGAATGTTGGTCTATGAATTTATTCCCAA TAACAATTTAGAACATCACCTTCATGGAAAAGGTGTGCCTACCATGGATTGGCCTACTAGAATGCGGATCGCAATAGGATCAGCAAAAGGGCTTGCCTAT CTTCATGAAGACTGTCATCCACGCATCATTCATCGTGATATCAAAACTGCAAATGTCCTCATTGATGACAGTTTCGAAGCGAAGGTTCCACATTTAGTCC ACATGTTTACTTATTTTAACTATTCAATTGTTTTGCACATGTTATCAAACTTATGTTAAGCTAATTCATTATATGGCAACAATGCTTTTTAACCAGGTGG CTGATTTTGGATTGGCTAAGTTGACTTCTGACAATAATACACATGTATCTACTCGTGTCATGGGAACTTTTGGGTACCTTGCCCCTGAATATGCATCGAG TGGAAAGTTGACAGAGAAGTCTGATGTTTTCTCATTTGGTGTCATGCTATTGGAACTCATATCTGGGAAGCGACCTGTAGACCTCACAAACACCATGGAG GACAGCTTAGTGGACTGGGCTCGGCCACTACTGACTCGTGGACTGGAGGAGGATCCTGGAAACTTCCGGGAGTTGGTCGATCCATTTTTGGAGGGAATCT ACAATCCTCATGAAATGTCAAGGATGGCCGCTTGTGCTGCTGGCAGCATTCGCCACTCTGCCAGGAAGCGCCTAAAAATGAGCCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177286; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344800
| Blastp | Proline-rich receptor-like protein kinase PERK4 from Arabidopsis with 56.25% of identity |
|---|---|
| Blastx | Proline-rich receptor-like protein kinase PERK4 from Arabidopsis with 78.21% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT2G18470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421420.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |