Ll_transcript_345377

• Id Trinity: TRINITY_DN50474_c2_g1_i1
• Name Transcript: Ll_transcript_345377
• Sequence: TCGCATTCTATTCCTTCTTACCTCTCCAACCAAAACACCCACTTTCCCTCTTCCTCCCCCTCGCCGCAACCACCCCAAGATGCAGCAGCAGCAGCTTCCA CGTGTCACCGCCGCCACCACCGGCAGCGTCGTCCAAGATGCTTTCGGAGGAGCAATAGCTCTGATCCAATCCTCTCCCGCCACGTGGAAATCCGCTCTTT TCAGCAACCTCTTCATCTTCCTCATTGGTTCTCCGATTTTGGTAACTGGGTTATCACTTAATGGCATTGCTGCTGCTTTTCTTCTTGGAACGCTCATTTG GCGCGCTTTTGGACCTTCTGGGTTTCTCTTAGTTGCTACGTATTTTGTAATTGGTACAGCTGCAACAAAGGTCAAAATGGCGCAGAAAGTGGCTCAGGGG GTTGCTGAGAAAAGAGGAGGAAGAAGGGGTCCTAGCAGTGTAATTGGATCCAGTGTTGCTGGTTGTGTTTGTGCTTTCCTCACCATTTTCGGAGTTGGGG GAGACACATTTTCTCAGCTTTGGAGACTTGGGTTTGTTGCTAGTTTCTGTACGAAATTGAGTGATACTGTCGCAAGTGAGATAGGGAAGGCATATGGAAA AACAACGTACCTAGTTACAACATTCAAGGTAGTTCCAAGGGGGACAGAAGGGGCAGTTAGTGTGGAAGGAACCTTGGCTGGATTCTTCGCAGCTATAGTT CTCGCCATTGTTGCTTGTTTCTTGGGTGAGGTTGGTCGATATGAAGCGGTTATATGTGTATTAGCTTCTCAGATTGCTAATCTCGGTGAGAGCATAATTG GTGCTGCACTTCAAGAGAAGGAAGGATTTCGATGGCTTAATAATGATGCAGTTAATATCATCAACATATCAATGGGTAGTGTTATAGCAGTCTTGATGCA CCAAGCACTTCAGAGCTGGCATATCTAAATTTGCTGCAAGATTTACTAGGAGCTCAATCTTCACCAACAATCTTGTGACCATTCTTTCAAGTGCTTATCT AAACTTTGTTAGAATAGAGCATATGAGCTATGTATTACTCCATCCGAAACCGTCTCGGATTTATACTTCTCGGGTATTTTTCAGGTGTCATCATGAAGCA GTCTTTCCTAGAATGAGATTAATGTAGATCAAAGCCCTTCCTACCGATCAAACGTGAGCATATCGGTTGTTAAAAATAATAACAGAACTTGATATAACCC ACAGCCATGATTCAAGTCGCTTGGATTGAAGGCAACGGTTCTTTTAATTGCAGATGTAAATTTTTGTTTACCTGATTCAGTTTCTTGTCAAGAAATAGAA CAGTTTGTTGTATCCCTTTTCTTTGAGACTCCTTTTTTGTTTCTCTTTTATCTTTGGCAGTTGAAAGGATGACTTCGGTACAATCGAAAGGTTGTTGCTT AGTTGAGACGATGAGTTCGTTGCATATATCGACTCCCCCTAGACCCGGCTAAGTGGAAGTTTCATGCATCGGACCGTCCTTTTTTATATCTTGGTCTAGA GTTCATATATACACTCACTGAGGTGCTTCTAAAATGTAGAATGTAGATCTCGAAACTATAGTTGAAGGGTAGGTGCAGGTTTTCATTTTTCAATGATGTG TAGTTAAGTTTTTCATATTTGCATCACATTGTATATACTTTTCTGTATAACTCATTCTAATTTTGACATACAAGCTTAGTGTTATTTTATCTCTCTAATA ACTCTGGCATTTAAGAGAGAAAATATCAAATTTGTCTATTGATTTATTGAAAAATATTTGGGTCCATATGCTGTATTATGAGAGATTAATCTCTTGTTAA TTGTGGGAAACATAT
• Tissue: pods
• Gene name: LI_gene_177461;
• Additional information: details;

Expression of Ll_transcript_345377

FPKM

• PAB: 2.1
• PNAB: 1.7
• PS1: 1.8
• PS2: 1.6
• PS3: 2.6
• PW1: 1.2
• PW2: 2
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345377

• Blastp: Protein VTE6, chloroplastic from Arabidopsis with 74.71% of identity
• Blastx: Protein VTE6, chloroplastic from Arabidopsis with 74.71% of identity
• Eggnog: Integral membrane protein DUF92(COG1836)
• Kegg: Link to kegg annotations (AT1G78620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454882.1)
• Pfam: Integral membrane protein DUF92 (PF01940.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;