| Id Trinity | TRINITY_DN50481_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_346895 |
| Sequence | GAAACATTGTTTCCTCATTACCATCCAATTGGAAATGGATAAAAAGAAGGAGTACCATGAACATGTCCGAAGAAACTGTATTAACTGTCATATATAAACC AAACCAACACAACACAAGTACATTTCATTCAACTTCTTCATCTTCATCTTAAACAATCAAACAAATAAACATGGCAAAAGAGGATTGCTTCATTGGTGCA GTTGATCAAGGAACAAGCAGCAGCAGATTCATCATCTATGATGCTTCAGCTAAACCCATTGGATCTCATCAAGTTGAGTTCACTCAATTCTACCCACAAG CAGGATGGGTAGAGCATGATCCAATGGAGATATTAGAAAGTGTGAAGGTATGTGTTGCTAAGGCTGTGGATAAAGCTACAGCTGATGGATTCAATGTTGA TAAGAATTTGAAGGCTGTTGGTCTCACCAATCAGAGAGAGACCACTCTTGTTTGGAGCAAATCATCTGGTGTTCCTCTTTACAATGCCATTGTTTGGATG GATGCTAGAACCACTTCTATTTGCAGTCGATTGGAAAAGCAATTATCTGGAGGCAAAAGCCATTTTGTGGAGAGTTGTGGTTTGCCTATAAGCTCATATT TCAGTGCTGTGAAACTTTTATGGTTGATAGAAAATGTGGAAGCAGTGAAGGAAGCTATAGATAAAAAAGACGCCCTGTTCGGAACTATAGACACTTGGTT GATATGGCAATTAACAGGTGGGTTGAAGGGAGGTTTGCATGTGACTGATGTTTCGAATGCATCTCGAACGATGCTGATGAATCTCAAGACCCTTGATTGG GATGCATCTACCTTACAGGAGCTTGGAATTCCGGCCGAAATTTTGCCTAAAATTGTCAGCAATGCTGAAGTTATAGGAAATGTTGCTGCTGGATGGCCAT TTACCGGTGTCCCTATTGCAGGATGTTTAGGGGATCAACATGCAGCAATGTTAGGACAAGCATGTAGTAGAGGTGAGGCTAAAAGCACTTACGGCACTGG TGCTTTCATACTAATGAATACCGGAGAAGAGATAGTTAAATCGGCACATGGTCTTCTAACAACTGTTGCATTCAAACTTGGCAAGGAAGCTAAAACTATT TATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACAGTGTTGGCATGATTTCTAGCTCTAAGGAGATAGAGGAGCTGG CATCACAGGTTGAATCTGCCAAAGGGGTTTACTTTGTTCCCGCTTTTAATGGATTGTTCGCACCATATTGGCGCGAGGATGCTCGCGGTGTTTGTATTGG AATAACAAGGTTTACAACAAAGGCTCACATTGCTAGAGCTGTTCTTGAGTGCATAGCTTTTCAAGTCAAAGATGTATTGGATTCAATGCACAAAGATGCA GGGAATGTTGAATCCAATGACTTTTTACTCAGGGTAGACGGTGGCGCAACAGTTAACAACCTGTTGATGCAGATTCAGGCAGATTTGACAGGAAATGCAG TGATTAGACCTTCAGACATAGAGACAACAGCACGTGGAGCAGCCTTTGCTGCTGGATTAGCTGTTGGAGTATTTAAGGAAGAATATATCTTTGATTCTAA GGATAAAATGAAGGATGCTGTTGTTTTTAATCCTATAATGACTAAGGAAGTTAGGACCAAGAAAGTAGATTCATGGGGCAAAGCTGTTGTTAGATCCTAT GACTTAGCTGATCTTACTCTTTGAAGGACTTTACAAAAGTTTGTCGAGATCGACTACCCTCCTCAGACCCCATCAAATGGTAGTCTCGTATATCGGCCCG AACTTTTTAACATGTTTTCAACTTCTTGTAACACCATTATATCTTGCAGTGATAATGGTTAGTCTTAGTTACTAAAATGAAGTGAATAAGTTTGTTCATA AATGTTATTATGTTACTTACTTATCTGATAAATAAATTTGATATTTGGTTTTGCACACAAGAGAAGTAAACACCTTACATGACACTTAATTACTGTGTTG GTGTTGAAAGTGGTTGAACAAATAGTAGTGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177511; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346895
| Blastp | Glycerol kinase from Arabidopsis with 74.9% of identity |
|---|---|
| Blastx | Glycerol kinase from Arabidopsis with 74.9% of identity |
| Eggnog | Key enzyme in the regulation of glycerol uptake and metabolism (By similarity)(COG0554) |
| Kegg | Link to kegg annotations (AT1G80460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443350.1) |
| Pfam | FGGY family of carbohydrate kinases, N-terminal domain (PF00370.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |