Id Trinity | TRINITY_DN50488_c0_g1_i13 |
---|---|
Name Transcript | Ll_transcript_346730 |
Sequence | CAAAGTTCTGACACCATAGTTTGAACTTTGAAATATAGCAGAGGACGGAGTGTGACTTTTTTACAGCAAAAGAAATTAAAAAAAGAAAAAAGGTAAATGA ATTTGGGTTCCTCACTGACACTGTCACGTGATCTCAGTACATCTCTTAACCCACGCGCCCATTTCAGTTTAAGGTAAATGGGTGTCATCTCCAGGAAGAT CTTCCCAGCATGTGGAAACATGTGTGTTTGTTGTCCTGCTTTGAGGTCAAGTTCACGCCAACCGGTCAAGCGTTACAGAAAACTTATTGCTGATATCTTC CCCAAAGATGAGCTTCCAAATGAAAGAAAGATTGTCAAATTGTGTGAATATGCAGCAAGGAATCCTTTCCGGATACCAAAGATAGCAAAAATTCTTGAAG AAAGGTGCTATAAAGAACTGAGATCTGAGCACATTAAACTTGTGAGGATCATAGCAGAATCTTTCAACAAGTTGCTTTCCATTTGTAAGCTGCAGCTAGC ATACTTTGCTGTTGACGTGCTTAATGTAATTTGGGAACTCTTGTGCTATTCTAAGGATGACTCAGTTCGGACGCTTGGTTGCCAAACTTTAACACGGTTC ATCTATTGTCAGGTAGATTCCACGTATGCCCACAACATTGAGAAGTTGGTGAAGAAAGTATGTGAGCTAGCGCAGGAACATGGGGAAACACATGAAAAGC ACTGCATGAGGGCATCAAGCTTGCAATGCCTTTCAGCAATGGTTTGGTTCATGACAGAATTTTCACACATTTTTGTCGATTTTGATGAGATGGTTCATGC CACTTTAGATAACTATGAGCGAGGCAGACAAAGTGAAGATGCTGATGTCGAGGTAGAATCACATCATAATTGGGTGGATGAGGTTGTCCGTTGTGAAGGT CGGGGGAATTCAGTTGCTGGTACTGAAATTCGCTCTACCTGCCTGATCATCCAGCCACGACTAGAAATAAAGGATCCTTCCCTTTTGACTAGGGATGAAA TTGAAAAACCAGAAATATGGGCTCAGATATGTCTTCAAAGAGTGGCTGAATTAGCAAAAGAAAGCACAACTATGCGTCGTGTTCTGGATCCAATGTTTGT CTACTTCGATTCTAGGCAACATTGGGATCCTAAGAAAGGGTTAGCAATGAAGGTGTTGTCCAGCATGACCTACTTCATTGAAAACTCAGGGAATCAGCGG TTTATTATAGCTTCGGTGATACATCATCTGGATCACAAAAATGTTATGAATGACTCCCAACTTAAGACCAGTGTTGTCCAAGTTGCCACATCTTTGGCTA TGCAAATTAGATCAGGGAAAGGGTTGGCAGAGATTGGTTTCGTTGGCGACCTTTGCAGACATCTCAGGAAAAGTCTTCAAGCCTCCAATAAATTGGTTGA AGAACAAGAGTTGAACTTGAATATCTTGCTCCAAAATTCCATCGAGGACTGCATACTTGAAATTGCTAAGGGGATCGTTGATGCCCAGCCACTCTTTGAC TTGATGGCAATAACCTTAGACGATATGCCGTCTGGTGTTGTTGCTAGAGCTACCATTGGTTCACTGATAATTCTTGCCCGTGCTGTCACTTTAGCATTGT CTCGTTTACATTCACAGCAGGGATTTCCTGAAGCCCTTCTTATGCAACTCCTGAAAGTCATGTTGCATTCAGATGTGGAGGCTCGTGTTGGAGCACACCT TATATTTTCTGTTCTTATTTGTCCAAGTTCCTTCCATGCACACGGAGTTTCCTATCTGCGGTCTGGGTACCTAGATCAACGCAGTAAGAGGCATTCTCAC ACTGCTTCTGCATCTGCATCGATTGCAGCTTTACTCGAAAAGCTCCGCAAAGGCAGAGATGACAGCAAGACAGAAAATCATGGGACTATTGTTCTTGATG GTAGCAAAGGAAGGGATGTTATGGCTGAAGACTTGAAGCAAGGCGCTGGCTTGAAGAATTCCCCAAACTTTTACAAACTCGGCTCTATCATGGATAGGGC TACTGGATCACCAAGTTTGACCGATGCAGAACCATATGTTATGAAGCTAAGTGAAGATCAAATGTCTCAGTTGCTTTCTGCCTTTTGGATTCAAGCCACT GTTCCTGATAATTTACCCTCAAATATGGAAGCTATAGGTCACTCATTCATAATAACACTAATGTTTTTACGCACAAAGAAACTGAAAGATAGAGATAACC TGGTAATCCGCTTTTTCCAGCTTCCTCTGTCTCTCTGGACTATGTTGTGTGACCCAAGTTATGCAGGAATCTTGCCCCCAGCATGTCAGAGGACCCTCCT TGTATTATCAGCTGGCATGTTGATGTTTGCCTGCAAAATATATCAGATTCATGATCTGAATGGTGTGTTCACGTCGTTAGCAATATCTGAAGTTGATCCA TTCTTGGGTATCAGTGATGATTATCAAGTATATGCTAAGGTCCATGTGGATTTTAAAGAATATGGTACTGCTGCTGATAATGAGCTGGCCATGTCGGTAT TATCTAATTTACGGGACAAAATATGCAAATGTCACAAGACCCTAAAGGATGTTTTGGTTCAAGAATTAGCTAATGTTGTTGAGCTGGATACAGTTGATGT ATCTACAGTACTGTCAGAGACGTTCACACCTGATGAAGAATATGTGTTTGGTCAACAATCAATTCTTCATAAAAATCAAATGATTTATCATTCCTTGGAG TCATTGTCATTTGACGGGGATTTTCCATCAAGTTCAGTAGCTGAAGATGACACCATAAGTGAAACATCTGTTTCTGACCTTGCTCGATTTGTCCCAAAGA TTCCTGCTTCCCCTTCTGTGTCTCATGTTATCAGTATTGGACAACTTATGGAATCGGCACTAGAGGTAGCTGGCCAGGTGGCAGGAACAGCTGTCTCTAC TTCACCCCTTCCATACAACACCATGGCTAGGCAGTGCGAAACACTCGGGACATGTGGAAGGACAAAGCTTTCAAATTGGCTGGCCTTTGAGAATCGTTAC ATTCAAACAACGGACGAGCCGTTTCTGGCAATTGCTGATAATAGGACTTCAGAACTAGAAAAGGTCTGTCTTAAATATATAAGCATTTGTATTATACTTG TCACTTAAGTGTGTTTTCATATTTATTTCAGTTGCAACTGATGGAGGCATGATATTTCTATCTATTCTAAACAAATCTTGTGAAATGCCAACGGCTACTT ATTGGACACATTCCAATTATTTTCGGTCTTATTGCAAATAAATCCAACCCCTCAAATGTAGTGCTGACATTCCATTTCGTATTTATGTGTAGGAAACAAG TGGCGGTGGGAATGACCAAGTAGCCATATTGCCGAGGAACCCGTGGCTCGCCATGAAGTTACCTCCTGCTAGCCCCTTTGACAATTTCCTTAAGGCTGCT AGGTATTAAGATTAAATGAGTTGTATGTATACATCTGCTATGTTAATCTATGTATAGCTCTAGTACTAATATTCATCCAGACACAACTTTCTAGGATTAG TTGCTTCACAAACTTGAATATCATTTTATGGTGCCTGTTCCCACTTAATGGGCTAGGTAAATTGTAGGACTACTATTTCTTAACTGAACTGTTTACAGCT CTGAGCCATTTGGAATATTAACTGTTTAAGTGGGGTAGAGTGCTTATTGACTCTTATTTTGAAACCTGTTTTGGAGTCAAGTCTTCCACACATATGATGT ATAATGGTACTAACAAATTTTGGAGCCTCCATTTTCTTGTTTTTCTCAATCTCCATAATAATGGAAAGGGAAAACAAAGAAATGTTATCAGAAATGAAAT AGACTTAATCTGGATTTGAAATTTAATTCCGGC BLAST |
Tissue | pods |
Gene name | LI_gene_177563; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346730
Blastp | Protein EFR3 homolog from Caenorhabditis with 21.21% of identity |
---|---|
Blastx | Protein EFR3 homolog A from Homo with 21.38% of identity |
Eggnog | EFR3 homolog(ENOG410YJSK) |
Kegg | Link to kegg annotations (CBG02625) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428195.1) |
Pfam | - |
Rfam | - |
GO | - |