| Id Trinity | TRINITY_DN50488_c0_g1_i27 |
|---|---|
| Name Transcript | Ll_transcript_346744 |
| Sequence | CAAAGTTCTGACACCATAGTTTGAACTTTGAAATATAGCAGAGGACGGAGTGTGACTTTTTTACAGCAAAAGAAATTAAAAAAAGAAAAAAGGTAAATGA ATTTGGGTTCCTCACTGACACTGTCACGTGATCTCAGTACATCTCTTAACCCACGCGCCCATTTCAGTTTAAGGTTCCTTCTTCATTTTCTGTCATATGC TATTTCTTTTTTGCTTCTCTTCTTCCCATTGCTTCACTTTTACTGTGTATAAGCTTATAAGGTTTCATCTTCCACTACCAGATCTTCTTTCACAAAGCTA GGTAAATGGGTGTCATCTCCAGGAAGATCTTCCCAGCATGTGGAAACATGTGTGTTTGTTGTCCTGCTTTGAGGTCAAGTTCACGCCAACCGGTCAAGCG TTACAGAAAACTTATTGCTGATATCTTCCCCAAAGATGAGCTTCCAAATGAAAGAAAGATTGTCAAATTGTGTGAATATGCAGCAAGGAATCCTTTCCGG ATACCAAAGATAGCAAAAATTCTTGAAGAAAGGTGCTATAAAGAACTGAGATCTGAGCACATTAAACTTGTGAGGATCATAGCAGAATCTTTCAACAAGT TGCTTTCCATTTGTAAGCTGCAGCTAGCATACTTTGCTGTTGACGTGCTTAATGTAATTTGGGAACTCTTGTGCTATTCTAAGGATGACTCAGTTCGGAC GCTTGGTTGCCAAACTTTAACACGGTTCATCTATTGTCAGGTAGATTCCACGTATGCCCACAACATTGAGAAGTTGGTGAAGAAAGTATGTGAGCTAGCG CAGGAACATGGGGAAACACATGAAAAGCACTGCATGAGGGCATCAAGCTTGCAATGCCTTTCAGCAATGGTTTGGTTCATGACAGAATTTTCACACATTT TTGTCGATTTTGATGAGATGGTTCATGCCACTTTAGATAACTATGAGCGAGGCAGACAAAGTGAAGATGCTGATGTCGAGGTAGAATCACATCATAATTG GGTGGATGAGGTTGTCCGTTGTGAAGGTCGGGGGAATTCAGTTGCTGGTACTGAAATTCGCTCTACCTGCCTGATCATCCAGCCACGACTAGAAATAAAG GATCCTTCCCTTTTGACTAGGGATGAAATTGAAAAACCAGAAATATGGGCTCAGATATGTCTTCAAAGAGTGGCTGAATTAGCAAAAGAAAGCACAACTA TGCGTCGTGTTCTGGATCCAATGTTTGTCTACTTCGATTCTAGGCAACATTGGGATCCTAAGAAAGGGTTAGCAATGAAGGTGTTGTCCAGCATGACCTA CTTCATTGAAAACTCAGGGAATCAGCGGTTTATTATAGCTTCGGTGATACATCATCTGGATCACAAAAATGTTATGAATGACTCCCAACTTAAGACCAGT GTTGTCCAAGTTGCCACATCTTTGGCTATGCAAATTAGATCAGGGAAAGGGTTGGCAGAGATTGGTTTCGTTGGCGACCTTTGCAGACATCTCAGGAAAA GTCTTCAAGCCTCCAATAAATTGGTTGAAGAACAAGAGTTGAACTTGAATATCTTGCTCCAAAATTCCATCGAGGACTGCATACTTGAAATTGCTAAGGG GATCGTTGATGCCCAGCCACTCTTTGACTTGATGGCAATAACCTTAGACGATATGCCGTCTGGTGTTGTTGCTAGAGCTACCATTGGTTCACTGATAATT CTTGCCCGTGCTGTCACTTTAGCATTGTCTCGTTTACATTCACAGCAGGGATTTCCTGAAGCCCTTCTTATGCAACTCCTGAAAGTCATGTTGCATTCAG ATGTGGAGGCTCGTGTTGGAGCACACCTTATATTTTCTGTTCTTATTTGTCCAAGTTCCTTCCATGCACACGGAGTTTCCTATCTGCGGTCTGGGTACCT AGATCAACGCAGTAAGAGGCATTCTCACACTGCTTCTGCATCTGCATCGATTGCAGCTTTACTCGAAAAGCTCCGCAAAGGCAGAGATGACAGCAAGACA GAAAATCATGGGACTATTGTTCTTGATGGTAGCAAAGGAAGGGATGTTATGGCTGAAGACTTGAAGCAAGGCGCTGGCTTGAAGAATTCCCCAAACTTTT ACAAACTCGGCTCTATCATGGATAGGGCTACTGGATCACCAAGTTTGACCGATGCAGAACCATATGTTATGAAGCTAAGTGAAGATCAAATGTCTCAGTT GCTTTCTGCCTTTTGGATTCAAGCCACTGTTCCTGATAATTTACCCTCAAATATGGAAGCTATAGGTCACTCATTCATAATAACACTAATGTTTTTACAC ACAAAGAAACTGAAAGATATAGATAACCTGGTAATCCGCTTCTTCCAGCTTCCTTTGTCTCTCTGGAGTATGTTGTGTGACCCGAGTAATGGAATGTTGC ACCCAACATGTCAGAGGGCCACCCTTGTGTTATCAGCTGGCATGTTGATGTTCGCCTGCAAAATATATCAAATTCATGATCTGAAAGATGTGTTTACGTC ATTCGCAATATTTGAAGTTGATCCATTCTTGGGTATCAGTGATGATTATCAAGTATATGCTAAGGTCCATGTGGATGTTAGAGAATATGGTACTGCTGCT GATAATCAGCTGGCCATGTCAATGTTATCTGAATTACGGGACAAAATATGTGAATGTCACGAGACTATAAAGGATGTTTTGGTTCAAGGTTTAGTTAATG TCACTGAGCTGGATGCAGATGACGTGGCTACGATACTGTCAGAGACATTCATACCAGATGAAGAATTTGTGTTTGGTCAACAGTCCATTCTTGATCAAAA TCAAATGATTTATCACTCCCTGGAATCACTGTCATTTGATGGAGTGTGTTGTTATTTCTAAATCGATAATTGGTGCCAGTAGATCAGCTCCTGTATTATA TCTATTCTAATTGATTAAATTTGTCCCGATTGTGCAGGATTTTACCTCAACTTCAGTTGTTGAATATGACACAATAAGTGAAACATCTGTCTCTGACCTT GCTCGGTTTATCCCAAAGATTCCTGCTTCTCCTTCTGTGTATGATGTTATCAGCATCGGACAACTTATAGAATCGGCACTGGATGTAGCTGGTCAAGTTG CAGGAACTGTTGTCTCCACTTCACCCCTTCCGTATAAGACCATGGCTAGGCAGTGTGAAACACTTGGGACATGTGGAAGGACAAAGCTTTCAAATTGGCT GGCATTTGATAATCATTACAGTCAAGCAGCTGACGAATCATTTCTGGCAATTGTTGATAGCAGGAACTCGGAACTAGAAAAGGAAGCAAATGGTGATGGG TATGGCCAAATAATCACATTGCCAAGGGATCCATGGTTGGCCATGAAGTTACCTCCTACTAGCCCCTTTGACAACTTTCTTAAGGCTGCTAGGTGTTAAC ATTAGATGTGTTATATGTATAATACACCTGCTATGTTAATCTCTGCATATCTAAAATGTTAAATATTCTTCCAAAGGTGAGTTTCTAGGATCAGTTGATT CACAAACTTGAATGTCATTTTAGGGTGTCTATACCTACTTGAATTAGTTTTTGCAAGGGCTAGGTAAATTGTTGAAGTACTATTATTTCATAGCTGAAAG AGGGTAAATTGTTTAGTGATCATAAAGTCACGAGTTCAAATCCTGAAAACAACCTCTTTTTTTGTGGGGTAAGGGTGCTTACCTCTACCCTTCCTAGATT CCATTAAGTGAGAGCCTGAGCCGTCCTTTTTACTATTTAATACCTGAAATGTTTATGGCTTTATGCTATTTGGAATCATATCTGTTGAGGTGGGTTAGAA TGCTTATTGACTGCTATTTTGGAATCCTCGCTACTTCCTGTTTTGGAATCAACGCTTCCATGAATGTGATGTATAATGGAATTAACACATTTCGGTGTGC ACTAAACTGATGTTTAGATTTGTGAATATATGGATTCATTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177563; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346744
| Blastp | Protein EFR3 homolog from Caenorhabditis with 21.21% of identity |
|---|---|
| Blastx | Protein EFR3 homolog A from Homo with 21.38% of identity |
| Eggnog | EFR3 homolog(ENOG410YJSK) |
| Kegg | Link to kegg annotations (CBG02625) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428197.1) |
| Pfam | - |
| Rfam | - |
| GO | - |