Ll_transcript_344431

• Id Trinity: TRINITY_DN50493_c0_g2_i4
• Name Transcript: Ll_transcript_344431
• Sequence: CAAACAATAGTTGAAAATTTACCCCTACACTTTGGAGAAAATTGCAAGATATAACATTTCAATCCAAAAAAAGTTGGGTGGCATTATGGGAAATAACTCC ATCTTATAAAAAAAAAGCACTTTCCCTTGGAAGTGAAAAATTTCAGCTTTTATTGTTGTCTTGTGCATCTAGACTCAACTTTTTCACCTCAATTTTCCCA TAACAGGTTAGTCTGAACGTGACAGTTGTAATCTTTTGAGGGATTAGTGTGGTTCCAACAAGGATTTCAACTCTTCACATATTTCGATTGAGATCAATCT TTTCTTGGAGCAATTATAAATTAAATGTCTCTTCTTTGTCAGTTTGCTTTGCCATAGCACTTGCTGTCAGGTTTTGAAATCTGGAATTTTGATGGATTGC AATAAAGAAGAGGCCTTAAGGGCCAGGGATATGGCTGAAAAGAAGATGGAAAGCAAGGATTTTGCGGGGGCTCGTAAAGTTGCCCTTAAAGCTAAGCAAC TATATCCTGTTTTGGAGAATATCAGTCAAATTCTTATTGTTTGTGATGTACATTGCGCTGCCGAGAATAAATTGAATGGCAATGCAATGGACTGGTATAA AATTCTTCAAACTGAGTTGACAGCTAATGACACAACAATTAAGAAACAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACCAGTTTCCTGGT GCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGATAGCTTAAGCCGATCTAGGTTTGATGACATGTATCGCAGGGTTACAATGA CCAGGAATGCTACACCATCTTATAATGTTCAGAATGTTCAGATGAATTTTAATTCTGCAGTGCAAAGAAGTGTCAGGCCGGTATTTACAAACTTGAATCC TCAGCAACACCAACAGCCTAGACAGTCATCTCAGCAGGGTGGCCTTAATGGTGGCCGCCCTACGTTTTGGACTGCCTGCACTTTTTGCTCCTTTAGATTT GAGTATTACAGGGAAGTTTTAAATAGATCTCTTCGTTGTCAGAATTGCAATAAGCCATTCATTGCGTATGATGTGGATATGCAAGGTACAACTCCAGCAA CTAATTCAACCCCGCAAGCTTTTGGCCAGCAGAAATATGGTGTGAATCGAGGTACTTACAGTGCAGGTGTTGGATCTCAAGGTAATTTGAACACTAACAA GACCAATGCACGGCCTTCTGCGAAAAAAGGCTCTACTATTGACACCTCTAGAAAGCAAAATGGAAAGAGAAGGAAGAAGCAGGGAGAAAAATCCAGTGAA TCTTCTGATTCTATAGACAGCACGGATTCTGAAGACGATATTTTTGCTGACAATGATAAATTTCCTGGTCTAGAAAAGTTTTCATCTAATAGAGAAGAGA ACCCGCGTAGATCTACACGGCAAAAGCATCAGGTTTCGTACAATGAGAATGTGAGTGATGATGATGATGACGACTCATTAATACCTTCGAAAAGGAGCAA GTGGAGCAGCTCATCATCTGATGCTAATGAAAGTTGTCCACAGGCAGCTAAAGTCAATTACCAGTATGGTTCTGCTGGTGATACGAAAGATGATCTGAAA GAAGTCAAGTGTAAACGTTCTGAAGAGAGCTTAGTAAATGGAGATGTGGATATTAAAGAGACAAGGGGAAAAGAAGCAGTAAATGACTCAAAGGCTGATA AAGCTTCGGCGAGTACTTCTTTTGTCTTTCCTGATCCTGAATTCAACGACTTTGACAAGAAAGAAGGGTGCTTTGAGGTTGGGCAGATTTGGGCTATCTT TGACACAGCTGATGGCATGCCTAGATTCTATGCTATAATCAGAAGAGTTTTCTCTAACGGATTCAAGGTGCGGATAACATGGTTTGAAGCTGATCCAGAC GAAGATGATGAAATCCACTGGTTTAATGAGCAATTGCCAATTGCTTGTGGGAAATTTAAACTCGGTGCCACTGACACCACTAAAGATCATCTGATGTTCT CTCATTTGATTTGTTGTGAAAGGATTGGCCGCTCTACTTTTAAAGTGTATCCAAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATCAAATG GTACATGGATGCCAAATCTCATAAGCAGTATGATTATGAATTTGTTCAAATTTTGTCAGATTATGTTGAAGGTGAAGGCGTAGTTGTTGCATACTTGACC AAGTTGAAAGATTTTGTGAGTCTCTTCTCTCGAATTATGAAGGAAGGCAAACACTCAATTCAAATTCCATCAGCGGAGTTATTAAGATTCTCTCACAGGG TTCCTTC
• Tissue: pods
• Gene name: LI_gene_177598;
• Additional information: details;

Expression of Ll_transcript_344431

FPKM

• PAB: 0.4
• PNAB: 1.7
• PS1: 2.4
• PS2: 1.6
• PS3: 1.7
• PW1: 0.8
• PW2: 0.7
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344431

• Blastp: Chaperone protein dnaJ 49 from Arabidopsis with 31.29% of identity
• Blastx: DnaJ protein homolog 1 from Sophophora with 55.56% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G49060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425595.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;