Ll_transcript_344444

• Id Trinity: TRINITY_DN50493_c0_g2_i8
• Name Transcript: Ll_transcript_344444
• Sequence: AATATCATTATTTCTTACTTTTACTGTTTCAATAATTTTCTCTATAGCATATTTCAAATTTTGTGGAATGCATTATTTTCCCCTTATTTGAATGATGAAT GAATCAGTGTCTTCGTTTATGTGCCTTTCCTTTACTGTAATGGGTTAGTCTGAATGTGACAACTGTAATCTTTTGAGAGATTAGCGTGGTGCTGATAGGG CTTTCAACTCTTTACATTTTTTAATTGAGATCAATCTGTTCTTGGAGCACTTAATTAAATGTCTTTTCTTTGTCCGTTTGCTTTGCCATAGCACTTTTTG AAATCTGGAATTTTGATGGATTGCAATAAAGAAGAGGCCTTAAGGGCCAGGGATATGGCTGAAAAGAAGATGGAAAGCAAGGATTTTGCGGGGGCTCGTA AAGTTGCCCTTAAAGCTAAGCAACTATATCCTGTTTTGGAGAATATCAGTCAAATTCTTATTGTTTGTGATGTACATTGCGCTGCCGAGAATAAATTGAA TGGCAATGCAATGGACTGGTATAAAATTCTTCAAACTGAGTTGACAGCTAATGACACAACAATTAAGAAACAATACAGGAAGTTTGCTCTCCAACTTCAT CCTGACAAAAACCAGTTTCCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGATAGCTTAAGCCGATCTAGGTTTGATG ACATGTATCGCAGGGTTACAATGACCAGGAATGCTACACCATCTTATAATGTTCAGAATGTTCAGATGAATTTTAATTCTGCAGTGCAAAGAAGTGTCAG GCCGGTATTTACAAACTTGAATCCTCAGCAACACCAACAGCCTAGACAGTCATCTCAGCAGGGTGGCCTTAATGGTGGCCGCCCTACGTTTTGGACTGCC TGCACTTTTTGCTCCTTTAGATTTGAGTATTACAGGGAAGTTTTAAATAGATCTCTTCGTTGTCAGAATTGCAATAAGCCATTCATTGCGTATGATGTGG ATATGCAAGGTACAACTCCAGCAACTAATTCAACCCCGCAAGCTTTTGGCCAGCAGAAATATGGTGTGAATCGAGGTACTTACAGTGCAGGTGTTGGATC TCAAGGTAATTTGAACACTAACAAGACCAATGCACGGCCTTCTGCGAAAAAAGGCTCTACTATTGACACCTCTAGAAAGCAAAATGGAAAGAGAAGGAAG AAGCAGGGAGAAAAATCCAGTGAATCTTCTGATTCTATAGACAGCACGGATTCTGAAGACGATATTTTTGCTGACAATGATAAATTTCCTGGTCTAGAAA AGTTTTCATCTAATAGAGAAGAGAACCCGCGTAGATCTACACGGCAAAAGCATCAGGTTTCGTACAATGAGAATGTGAGTGATGATGATGATGACGACTC ATTAATACCTTCGAAAAGGAGCAAGTGGAGCAGCTCATCATCTGATGCTAATGAAAGTTGTCCACAGGCAGCTAAAGTCAATTACCAGTATGGTTCTGCT GGTGATACGAAAGATGATCTGAAAGAAGTCAAGTGTAAACGTTCTGAAGAGAGCTTAGTAAATGGAGATGTGGATATTAAAGAGACAAGGGGAAAAGAAG CAGTAAATGACTCAAAGACGGATAAAGCTTTGGAGAGCACTTCTTTTGTCTTTCCTGATCCCGAGTTCAATGACTTTGACAAGAAAGAAGGGTGCTTTGA GGTTGGGCAGATTTGGGCTATCTTTGACACAGCTGATGGCATGCCTAGATTCTATGCTATAATCAGAAGAGTTTTCTCTAACGGATTCAAGGTGCGGATA ACATGGTTTGAAGCTGATCCAGACGAAGATGATGAAATCCACTGGTTTAATGAGCAATTGCCAATTGCTTGTGGGAAATTTAAACTCGGTGCCACTGACA CCACTAAAGATCATCTGATGTTCTCTCATTTGATTTGTTGTGAAAGGATTGGCCGCTCTACTTTTAAAGTGTATCCAAGAAAGGGAGAAACTTGGGCCCT TTTTAAAAATTGGGATATCAAATGGTACATGGATGCCAAATCTCATAAGCAGTATGATTATGAATTTGTTCAAATTTTGTCAGATTATGTTGAAGGCGAA GGCATAGTTGTTGCATACTTGGCCAAGTTGAAAGATTTTGTGAGTCTCTTCTCTCGAATTATGAAGGAAGGCAAACACTCAATTCAAATTCCATCAGCGG AGTTATTAAGATTCTCTCACAGGGTTCCTTCTTTTAAAATGACTGGTGAAGAAAGACTAGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGCATCCTT GCCTCAGAATCTGGCAGAGATTGCTGTTCCTGAAGATGTGGAACTGGAGGCCGGTCATAATCCGTCAGTTGGGATGAGTACAAAACCTGAGAGATGCATC TAGTTCCAAGGTTGAGATTGTGATGGGACTTGAGGAGGAATTTGGTATTACTGTTGAAGAAGAAAGTGCTCAGACTATCACCACAGTTCAAGAAGCTGCT GATTTGATTGATAAGCTTCTTGAAAACAAGTAATAAAATAGCACACACTGATTTGGACCTTTTTGTTATATCTTCATGGAAGAGGGTTTTTTTTAATTAT ATCTTTGGTATTTTAGTTTGATTGTTCCTCAAGTAAC
• Tissue: pods
• Gene name: LI_gene_177598;
• Additional information: details;

Expression of Ll_transcript_344444

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 2
• PS2: 0
• PS3: 0.4
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344444

• Blastp: Chaperone protein dnaJ 49 from Arabidopsis with 31.29% of identity
• Blastx: Acyl carrier protein 4, chloroplastic from Cuphea with 82.5% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G49060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425595.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;